Assay Details
Target Gene Details
Entrez Gene ID: | 1130 |
Gene Name: | lysosomal trafficking regulator |
Gene Aliases: |
CHS, CHS1 |
Location: |
Chr.1:235661031-235883708 on Build GRCh38 |
Assay Gene Location: | Within Exon 60 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LYST | NM_000081.3 | 53 | 12045 | NP_000072.2 |
NM_001301365.1 | 53 | 12482 | NP_001288294.1 | |
XM_011544031.1 | 54 | 12207 | XP_011542333.1 | |
XM_011544032.1 | 54 | 12610 | XP_011542334.1 | |
XM_011544033.2 | 54 | 12357 | XP_011542335.1 | |
XM_011544034.1 | 53 | 12069 | XP_011542336.1 | |
XM_011544036.2 | 50 | 9861 | XP_011542338.1 | |
XM_017000150.1 | 53 | 11976 | XP_016855639.1 | |
BX649113.1 | 22 | 6855 | ||
U67615.1 | 53 | 12052 | AAB41309.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv832936 | Chr.1:235644298 - 235809947 on Build GRCh38 | Gain | LYST GNG4 |
nsv1011288 | Chr.1:235376656 - 235666302 on Build GRCh38 | Gain | LYST GNG4 TBCE B3GALNT2 |
More Information
Additional Information:
For this assay, SNP(s) [rs74986567] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |