Assay Details
Target Gene Details
Entrez Gene ID: | 58191 |
Gene Name: | C-X-C motif chemokine ligand 16 |
Gene Aliases: |
CXCLG16, SR-PSOX, SRPSOX |
Location: |
Chr.17:4733529-4739928 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 4 - Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CXCL16 | NM_001100812.1 | NP_001094282.1 | ||
NM_022059.3 | NP_071342.2 | |||
AF275260.1 | AAG31750.1 | |||
AF301016.1 | AAG34365.1 | |||
AF337812.1 | AAK38275.1 | |||
AK027389.1 | BAB55078.1 | |||
AK292114.1 | ||||
AK315017.1 | ||||
AY358909.1 | AAQ89268.1 | |||
BC017588.1 | AAH17588.1 | |||
BC044930.1 | AAH44930.1 | |||
CA307348.1 | ||||
JC209418.1 | ||||
JC209420.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain | LOC100130950 MIR6865 USP6 INCA1 CAMTA2 CXCL16 VMO1 ZNF594 ZMYND15 RNF167 SMTNL2 RABEP1 SCIMP ENO3 LOC400568 PELP1 GLTPD2 ALOX15 MIR6864 SLC25A11 ZNF232 GP1BA NUP88 LOC102724009 C1QBP LOC101927979 C17orf107 DHX33 MINK1 ZFP3 SLC52A1 ARRB2 KIF1C LOC101928000 SPAG7 LOC101559451 PFN1 MED11 TM4SF5 PSMB6 LOC107984973 RPAIN CHRNE PLD2 |
nsv833346 | Chr.17:4646256 - 4860871 on Build GRCh38 | Loss | GLTPD2 MINK1 ARRB2 CXCL16 VMO1 ZMYND15 LOC101559451 MED11 TM4SF5 PSMB6 LOC107984973 PELP1 PLD2 |
nsv1952 | Chr.17:4726245 - 4748889 on Build GRCh38 | Insertion | CXCL16 ZMYND15 MED11 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |