Assay Details
Target Gene Details
Entrez Gene ID: | 9429 |
Gene Name: | ATP binding cassette subfamily G member 2 (Junior blood group) |
Gene Aliases: |
ABC15, ABCP, BCRP, BCRP1, BMDP, CD338, CDw338, EST157481, GOUT1, MRX, MXR, MXR-1, MXR1, UAQTL1 |
Location: |
Chr.4:88090264-88231417 on Build GRCh38 |
Assay Gene Location: | Within Exon 20 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ABCG2 | NM_001257386.1 | 16 | 4106 | NP_001244315.1 |
NM_004827.2 | 16 | 4261 | NP_004818.2 | |
XM_005263354.3 | 16 | 4104 | XP_005263411.1 | |
XM_005263355.3 | 16 | 4211 | XP_005263412.1 | |
XM_005263356.3 | 16 | 3981 | XP_005263413.1 | |
XM_011532420.2 | 18 | 4375 | XP_011530722.1 | |
XM_017008852.1 | 16 | 4098 | XP_016864341.1 | |
XM_017008853.1 | 16 | 3901 | XP_016864342.1 | |
BC092408.1 | 16 | 4106 | AAH92408.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv4413 | Chr.4:88083754 - 88129196 on Build GRCh38 | Deletion | ABCG2 |
esv2665331 | Chr.4:87937174 - 88153583 on Build GRCh38 | Deletion | SPP1 ABCG2 PKD2 |
esv2759266 | Chr.4:87997399 - 88291967 on Build GRCh38 | Gain | PPM1K LOC105369192 ABCG2 PKD2 |
More Information
Additional Information:
For this assay, SNP(s) [rs115770495] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |