Assay Details
Target Gene Details
Entrez Gene ID: | 23645 |
Gene Name: | protein phosphatase 1 regulatory subunit 15A |
Gene Aliases: |
GADD34 |
Location: |
Chr.19:48872392-48876062 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PPP1R15A | NM_014330.3 | 2 | 1590 | NP_055145.3 |
AK001361.1 | 2 | 1561 | BAA91649.1 | |
AK225632.1 | 2 | 1561 | ||
AK296668.1 | 3 | 1084 | ||
AK297615.1 | 3 | 1478 | ||
AK298765.1 | 2 | 875 | ||
AK311366.1 | ||||
BC003067.2 | 2 | 1543 | AAH03067.1 | |
CR457259.1 | 1 | 1321 | CAG33540.1 | |
U83981.1 | 2 | 1543 | AAC25631.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | DKKL1 ZNF473 IZUMO1 SNAR-A13 FTL SNRNP70 DBP MIR4751 MIR4749 MAMSTR SYNGR4 TSKS FLT3LG CYTH2 IRF3 CA11 ADM5 HRC SEC1P PRR12 MIR6798 SLC6A16 BCL2L12 KDELR1 SNAR-B2 SNAR-B1 PTH2 BSPH1 PTOV1 C19orf68 PIH1D1 SNAR-A1 PLA2G4C-AS1 FUZ VRK3 PRRG2 FUT2 ALDH16A1 SPHK2 MIR6800 PTOV1-AS2 SNAR-C2 CGB7 RCN3 ATF5 FAM83E BCAT2 MIR4750 MIR5088 NTN5 PTOV1-AS1 SNAR-A7 SNAR-A2 RPL13A CPT1C HSD17B14 SNAR-A10 SNORD35B CGB5 LHB EMP3 SNAR-D PNKP SNAR-A4 LOC105447645 MIR6799 RUVBL2 CGB2 SNAR-A8 CARD8-AS1 C19orf73 GFY SNAR-A11 SNORD34 DHDH ELSPBP1 SNAR-A6 BAX FGF21 SNAR-G1 PRMT1 KCNJ14 FLJ26850 SLC17A7 NTF4 AP2A1 GRIN2D CCDC155 LIG1 RASIP1 GYS1 RPS11 LOC101059948 SNAR-A9 LIN7B MIR4324 SNAR-A3 LMTK3 CABP5 PPFIA3 RRAS AKT1S1 SIGLEC16 LOC101928295 SNAR-G2 SNORD35A SNAR-C5 MIR150 RPL18 CGB8 PLEKHA4 NUP62 SIGLEC11 SNAR-C4 LOC105372430 CGB1 CD37 NUCB1-AS1 FCGRT KCNA7 TEAD2 SNAR-A5 TRPM4 FUT1 TULP2 CGB3 GRWD1 PLA2G4C SNAR-C3 NOSIP MED25 SNAR-A12 SNORD33 CARD8 SNAR-A14 CCDC114 TMEM143 SNORD32A SULT2B1 LOC100287477 TBC1D17 IL4I1 NUCB1 SPACA4 SNAR-C1 ZNF114 SCAF1 PPP1R15A |
nsv470148 | Chr.19:48865586 - 48906934 on Build GRCh38 | Gain | PLEKHA4 TULP2 NUCB1 PPP1R15A |
nsv833856 | Chr.19:48847866 - 48986483 on Build GRCh38 | Loss | PLEKHA4 DHDH GYS1 TULP2 FTL NUCB1 BAX NUCB1-AS1 PPP1R15A |
nsv833855 | Chr.19:48750098 - 48949781 on Build GRCh38 | Loss | PLEKHA4 DHDH BCAT2 FUT1 TULP2 NUCB1 FGF21 NUCB1-AS1 HSD17B14 PPP1R15A |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |