Hs02582037_cn

• Gene Symbol: PRDM9
• Assay Reference Genome Location: Chr.5:23528005 on build GRCh38
• Cytoband: 5p14.2

Target Gene Details

• Entrez Gene ID: 56979
• Gene Name: PR domain 9
• Gene Aliases: MEISETZ, MSBP3, PFM6, ZNF899
• Location: Chr.5:23507609-23528597 on Build GRCh38
• Assay Gene Location: Within Exon 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PRDM9	NM_001310214.1	11	3059	NP_001297143.1
	NM_020227.3	11	3105	NP_064612.2
	AF275816.1	4	2311	AAF87242.1
	AK301776.1	11	3059
	DQ388610.1	11	3099	ABD47939.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2762506	Chr.5:22419490 - 24131170 on Build GRCh38	Gain	PRDM9 C5orf17 CDH12
nsv597544	Chr.5:23495211 - 23571434 on Build GRCh38	Gain	PRDM9
nsv1028347	Chr.5:23407127 - 23686843 on Build GRCh38	Loss	PRDM9

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

meiotic gene conversion
transcription, DNA-templated
regulation of transcription, DNA-templated
positive regulation of reciprocal meiotic recombination
histone lysine methylation

Function(s)

nucleic acid binding
histone-lysine N-methyltransferase activity
metal ion binding