Assay Details
Target Gene Details
Entrez Gene ID: | 4849 |
Gene Name: | CCR4-NOT transcription complex subunit 3 |
Gene Aliases: |
LENG2, NOT3, NOT3H |
Location: |
Chr.19:54137689-54155708 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 20 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNOT3 | NM_014516.3 | NP_055331.1 | ||
AF180474.1 | AAF29828.1 |
Target Gene Details
Entrez Gene ID: | 79165 |
Gene Name: | leukocyte receptor cluster member 1 |
Gene Aliases: |
- |
Location: |
Chr.19:54155639-54159743 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LENG1 | NM_024316.2 | 4 | 827 | NP_077292.2 |
AF211966.1 | 3 | 605 | AAG01393.1 | |
BC014986.1 | 4 | 792 | AAH14986.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3644783 | Chr.19:54151022 - 54159664 on Build GRCh38 | Gain | LENG1 CNOT3 |
nsv515623 | Chr.19:54102901 - 54179150 on Build GRCh38 | Loss | TMC4 LENG1 PRPF31 TFPT CNOT3 NDUFA3 MBOAT7 |
nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion | TMC4 LENG1 PRPF31 TFPT CNOT3 OSCAR NDUFA3 MBOAT7 TSEN34 |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | MIR527 MIR520C MIR525 MIR518C MIR523 MIR515-2 TARM1 PRPF31 CACNG7 MIR519B DPRX MIR371A MIR519D ZNF761 ZNF813 LOC105372457 MIR512-2 ZNF525 MYADM MIR520B MIR519C MIR512-1 MIR1283-1 MIR519E MIR498 MIR517B TFPT NLRP12 MIR1323 ZNF765 ZNF845 NDUFA3 LILRA5 BIRC8 MIR1283-2 MIR520A MIR516A2 MIR520H MIR518F MIR522 LENG1 CNOT3 MIR516B1 ZNF665 PRKCG MIR517C LOC284379 ZNF818P FAM90A27P MIR526B MIR520E MIR520F LILRB5 MIR518B MIR515-1 MIR518A2 MIR518E VSTM1 MIR524 ZNF677 VN1R4 MIR518A1 MIR516B2 MIR516A1 MIR521-2 MIR517A TMC4 MIR372 ZNF331 TPM3P9 MIR521-1 MBOAT7 MIR4752 CACNG6 MIR520D MIR935 MIR519A2 CACNG8 RPS9 MIR520G OSCAR MIR526A1 MIR373 LILRB3 MIR526A2 VN1R2 MIR519A1 MIR518D LILRA6 LILRB2 MIR371B TSEN34 |
More Information
Set Membership: |
Intragenic Exonic Non-exonic DGV Variation |