Assay Details
Target Gene Details
Entrez Gene ID: | 1942 |
Gene Name: | ephrin A1 |
Gene Aliases: |
B61, ECKLG, EFL1, EPLG1, LERK-1, LERK1, TNFAIP4 |
Location: |
Chr.1:155127873-155134910 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
EFNA1 | NM_004428.2 | 5 | 922 | NP_004419.2 |
NM_182685.1 | 4 | 856 | NP_872626.1 | |
AK057845.1 | 5 | 1335 | ||
AK289589.1 | 4 | 853 | ||
AL833641.1 | 4 | 854 | ||
AW274944.1 | ||||
BC032698.1 | 5 | 915 | AAH32698.1 | |
BC095432.1 | 5 | 904 | AAH95432.1 | |
M57730.1 | 5 | 890 | AAA58388.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509502 | Chr.1:154904407 - 155142291 on Build GRCh38 | Insertion | PMVK SHC1 CKS1B ZBTB7B EFNA4 DPM3 LOC100505666 DCST1 PBXIP1 DCST2 LENEP MIR4258 EFNA3 ADAM15 SLC50A1 EFNA1 PYGO2 FLAD1 LOC101928120 |
nsv547961 | Chr.1:155109822 - 155225189 on Build GRCh38 | Loss | TRIM46 GBAP1 MTX1 SLC50A1 DPM3 THBS3 EFNA1 MUC1 MIR92B KRTCAP2 |
nsv998756 | Chr.1:155107614 - 155164069 on Build GRCh38 | Gain | SLC50A1 DPM3 EFNA1 |
esv3587615 | Chr.1:155047853 - 155175013 on Build GRCh38 | Gain | EFNA3 TRIM46 EFNA4 ADAM15 SLC50A1 DPM3 LOC100505666 EFNA1 DCST1 KRTCAP2 |
dgv3n68 | Chr.1:155122502 - 155343618 on Build GRCh38 | Loss | ASH1L TRIM46 GBAP1 GBA FDPS DPM3 RUSC1-AS1 THBS3 LOC105371451 HCN3 RUSC1 PKLR MTX1 SLC50A1 EFNA1 CLK2 SCAMP3 FAM189B MUC1 MIR92B KRTCAP2 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |