Assay Details
Target Gene Details
Entrez Gene ID: | 6472 |
Gene Name: | serine hydroxymethyltransferase 2 |
Gene Aliases: |
GLYA, HEL-S-51e, SHMT |
Location: |
Chr.12:57229573-57234935 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 10 - Exon 11 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv482992 | Chr.12:56206217 - 57706217 on Build GRCh38 | Gain+Loss | PRIM1 LOC101927583 COQ10A MIR1228 INHBE SNORD59B ZBTB39 HSD17B6 PAN2 SLC26A10 MIR616 CNPY2 TAC3 NEMP1 LRP1-AS SLC39A5 RDH16 NACA NABP2 RBMS2 GLI1 STAT2 TIMELESS STAT6 DDIT3 MBD6 SDR9C7 MARS R3HDM2 PTGES3 MIP INHBC ATP5B GPR182 APOF NXPH4 SPRYD4 HBCBP ARHGAP9 MIR6758 NDUFA4L2 IL23A ANKRD52 BAZ2A SHMT2 ARHGEF25 SNORA105C PIP4K2C MYO1A B4GALNT1 SNORD59A DCTN2 DTX3 LRP1 NAB2 GLS2 STAC3 OS9 KIF5A CS RNF41 |
nsv519293 | Chr.12:57189889 - 57243810 on Build GRCh38 | Loss | STAC3 MIR1228 NXPH4 NDUFA4L2 LRP1 SHMT2 |
nsv952189 | Chr.12:57127118 - 57245617 on Build GRCh38 | Deletion | LRP1-AS STAC3 MIR1228 NXPH4 NDUFA4L2 LRP1 SHMT2 |
dgv96n21 | Chr.12:57139199 - 57243810 on Build GRCh38 | Loss | LRP1-AS STAC3 MIR1228 NXPH4 NDUFA4L2 LRP1 SHMT2 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |