Assay Details
Target Gene Details
Entrez Gene ID: | 5360 |
Gene Name: | phospholipid transfer protein |
Gene Aliases: |
BPIFE, HDLCQ9 |
Location: |
Chr.20:45898620-45912364 on Build GRCh38 |
Assay Gene Location: | Within Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PLTP | NM_001242920.1 | 7 | 805 | NP_001229849.1 |
NM_001242921.1 | 7 | 717 | NP_001229850.1 | |
NM_006227.3 | 9 | 1090 | NP_006218.1 | |
NM_182676.2 | 8 | 934 | NP_872617.1 | |
AB076694.1 | 9 | 874 | BAB79630.1 | |
AF052157.1 | 6 | 592 | ||
AK092397.1 | 9 | 831 | ||
AK092523.1 | 8 | 722 | ||
AK097009.1 | 8 | 1388 | ||
AK222690.1 | 9 | 878 | BAD96410.1 | |
AK289371.1 | 8 | 722 | ||
AK293150.1 | 7 | 633 | ||
AK299181.1 | 7 | 597 | ||
BC005045.1 | 8 | 715 | AAH05045.1 | |
BC019847.1 | 9 | 872 | AAH19847.1 | |
BC019898.1 | 9 | 865 | AAH19898.1 | |
L26232.1 | 9 | 880 | AAA36443.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv3393 | Chr.20:45903113 - 45913226 on Build GRCh38 | Deletion | PLTP |
nsv833991 | Chr.20:45885631 - 46068708 on Build GRCh38 | Loss | LOC107985388 MMP9 NCOA5 SLC12A5 NEURL2 ZNF335 CTSA PCIF1 SPATA25 PLTP |
nsv517296 | Chr.20:45854586 - 45965936 on Build GRCh38 | Loss | LOC107985388 ACOT8 ZSWIM1 ZSWIM3 NEURL2 ZNF335 CTSA PCIF1 SPATA25 PLTP |
nsv586134 | Chr.20:45899835 - 45905120 on Build GRCh38 | Gain | PLTP |
nsv833990 | Chr.20:45771510 - 45946844 on Build GRCh38 | Loss | LOC107985388 ZSWIM1 TNNC2 DNTTIP1 ZSWIM3 PCIF1 SNX21 PLTP WFDC3 ACOT8 NEURL2 CTSA UBE2C SPATA25 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |