Assay Details
Target Gene Details
Entrez Gene ID: | 64601 |
Gene Name: | VPS16, CORVET/HOPS core subunit |
Gene Aliases: |
hVPS16 |
Location: |
Chr.20:2840697-2866732 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 11 - Exon 12 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
VPS16 | NM_022575.3 | NP_072097.2 | ||
NM_080413.2 | NP_536338.1 | |||
AF308801.1 | AAG34678.1 | |||
AK055787.1 | BAB71013.1 | |||
AL834401.1 | CAD39063.1 | |||
BC073959.1 | 1 | 147 | AAH73959.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3645020 | Chr.20:2816405 - 2926274 on Build GRCh38 | Gain | VPS16 PTPRA PCED1A TMEM239 |
nsv1057464 | Chr.20:2650623 - 2989686 on Build GRCh38 | Gain | SNORD56 SNORD57 SNORD110 MIR1292 CPXM1 TMEM239 NOP56 EBF4 VPS16 SNORA51 PTPRA IDH3B C20orf141 SNORD86 PCED1A |
nsv522009 | Chr.20:2745032 - 3030542 on Build GRCh38 | Gain | EBF4 VPS16 PTPRA C20orf141 CPXM1 PCED1A TMEM239 |
nsv833895 | Chr.20:2730164 - 2882236 on Build GRCh38 | Loss | EBF4 VPS16 PTPRA C20orf141 CPXM1 PCED1A TMEM239 |
esv2762056 | Chr.20:2740745 - 2944353 on Build GRCh38 | Gain | EBF4 VPS16 PTPRA C20orf141 CPXM1 PCED1A TMEM239 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |