Assay Details
Target Gene Details
Entrez Gene ID: | 388428 |
Gene Name: | AATK antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.17:81165507-81183164 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 4 - Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AATK-AS1 | NR_027255.1 | |||
AK126811.1 | BAC86704.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv26223 | Chr.17:80659041 - 81736487 on Build GRCh38 | Gain+Loss | FAAP100 LOC105371925 LOC100130370 MIR338 MIR4740 TMEM105 LOC105371921 MIR3186 SLC38A10 OXLD1 CCDC137 FSCN2 LOC101928855 AATK-AS1 LOC100129503 RPTOR BAIAP2-AS1 PDE6G NPLOC4 MRPL12 CHMP6 BAIAP2 LOC400627 CEP131 TSPAN10 MIR657 AATK HGS ACTG1 MIR3065 MIR1250 SLC25A10 LINC00482 ARL16 LOC107985021 MIR6786 TEPSIN LOC107985022 BAHCC1 C17orf89 |
nsv1057306 | Chr.17:81154954 - 81207813 on Build GRCh38 | Loss | CEP131 AATK-AS1 AATK |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | B3GNTL1 MAFG LOC105376790 P4HB LOC105371925 NARF LOC100130370 CCDC57 MIR3186 SNORD134 CCDC137 AATK-AS1 ARHGDIA HEXDC CD7 LOC105371944 NPLOC4 MRPL12 CSNK1D FASN SLC16A3 FN3K TBCD AATK ACTG1 PPP1R27 UTS2R OGFOD3 PYCR1 ANAPC11 LRRC45 ARL16 NPB MYADML2 MIR6786 TEPSIN TEX19 LOC101929511 MCRIP1 ASPSCR1 FAAP100 RAB40B GPS1 PCYT2 MIR4740 TMEM105 ALYREF SLC38A10 OXLD1 MIR4525 FSCN2 SECTM1 MAFG-AS1 LOC101929552 C17orf62 NOTUM RAC3 PDE6G LOC105376791 GCGR CEP131 TSPAN10 DUS1L HGS RFNG SLC25A10 SIRT7 WDR45B LINC00482 STRA13 FOXK2 ZNF750 FN3KRP DCXR BAHCC1 MIR6787 C17orf89 |
dgv46n68 | Chr.17:81133921 - 81288932 on Build GRCh38 | Loss | CEP131 AATK-AS1 LOC105371925 AATK TEPSIN SLC38A10 C17orf89 |
nsv1065052 | Chr.17:81080876 - 81204920 on Build GRCh38 | Gain | CEP131 AATK-AS1 MIR657 MIR338 AATK MIR3065 MIR1250 BAIAP2 |
nsv470619 | Chr.17:81032233 - 81349843 on Build GRCh38 | Loss | CEP131 MIR657 LOC105371925 MIR338 AATK MIR3065 TMEM105 MIR1250 SLC38A10 LINC00482 AATK-AS1 TEPSIN BAIAP2-AS1 BAIAP2 C17orf89 |
dgv3292n100 | Chr.17:81019582 - 81204920 on Build GRCh38 | Gain | CEP131 AATK-AS1 MIR657 MIR338 AATK MIR3065 BAIAP2-AS1 MIR1250 BAIAP2 |
nsv1064123 | Chr.17:81168449 - 81282457 on Build GRCh38 | Gain | CEP131 AATK-AS1 LOC105371925 TEPSIN SLC38A10 C17orf89 |
nsv952389 | Chr.17:81137501 - 81593774 on Build GRCh38 | Deletion | FAAP100 CEP131 LOC105371925 LOC100130370 AATK ACTG1 MIR4740 TMEM105 MIR3186 SLC38A10 LINC00482 FSCN2 AATK-AS1 TEPSIN NPLOC4 BAHCC1 C17orf89 |
More Information
Additional Information:
For this assay, SNP(s) [rs113860147,rs76435140] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Non-exonic DGV Variation |