Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 14 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | NP_001280563.1 | ||
NM_021008.3 | NP_066288.2 | |||
AB209831.1 | BAD93068.1 | |||
AF007165.1 | AAB62704.1 | |||
AF049459.1 | AAC79676.1 | |||
AF049460.1 | AAC79677.1 | |||
BC053322.1 | AAH53322.1 | |||
BQ267366.1 | ||||
HY324291.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv1522n54 | Chr.11:557342 - 656845 on Build GRCh38 | Loss | IRF7 SCT LOC143666 MIR210HG MIR210 PHRF1 DRD4 CDHR5 DEAF1 LMNTD2 RASSF7 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | ANO9 PTDSS2 PIDD1 CD151 MIR210HG AP2A2 PANO1 MUC5AC PHRF1 CDHR5 DEAF1 PDDC1 RASSF7 SNORA52 POLR2L CHID1 IRF7 LOC143666 CRACR2B MIR210 PKP3 DRD4 CEND1 TALDO1 MUC2 SLC25A22 TSPAN4 EPS8L2 MIR6744 B4GALNT4 TOLLIP RPLP2 PNPLA2 HRAS LOC171391 LRRC56 SCT TMEM80 LOC101059906 MUC5B SIGIRR RNH1 MUC6 LMNTD2 LOC101927503 |
nsv552861 | Chr.11:589246 - 662407 on Build GRCh38 | Loss | IRF7 SCT PHRF1 DRD4 CDHR5 DEAF1 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | EPS8L2 TMEM80 DRD4 DEAF1 TALDO1 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | ANO9 PTDSS2 PIDD1 CD151 MIR210HG AP2A2 PANO1 MUC5AC PHRF1 CDHR5 DEAF1 PDDC1 RASSF7 SNORA52 POLR2L CHID1 IRF7 LOC143666 CRACR2B MIR210 DRD4 TOLLIP-AS1 CEND1 TALDO1 MUC2 SLC25A22 TSPAN4 EPS8L2 MIR6744 TOLLIP RPLP2 PNPLA2 HRAS LOC171391 LRRC56 SCT TMEM80 LOC101059906 MUC5B SIGIRR RNH1 MUC6 LMNTD2 LOC101927503 |
esv2762889 | Chr.11:606294 - 653614 on Build GRCh38 | Loss | IRF7 SCT PHRF1 DRD4 CDHR5 DEAF1 |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | MIR210HG PHRF1 CDHR5 DEAF1 RASSF7 HRAS LRRC56 IRF7 SCT LOC143666 MIR210 DRD4 LMNTD2 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | ANO9 PTDSS2 PIDD1 CD151 MIR210HG AP2A2 PANO1 PHRF1 CDHR5 DEAF1 PDDC1 RASSF7 SNORA52 POLR2L CHID1 IRF7 LOC143666 CRACR2B MIR210 PKP3 DRD4 CEND1 TALDO1 SLC25A22 TSPAN4 EPS8L2 B4GALNT4 RPLP2 PNPLA2 HRAS LOC171391 LRRC56 SCT TMEM80 LOC101059906 SIGIRR RNH1 LMNTD2 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | PTDSS2 MIR210HG PHRF1 CDHR5 DEAF1 RASSF7 HRAS LRRC56 IRF7 SCT LOC143666 LOC101059906 MIR210 DRD4 RNH1 LMNTD2 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | PTDSS2 PIDD1 CD151 MIR210HG PANO1 PHRF1 CDHR5 DEAF1 PDDC1 RASSF7 SNORA52 POLR2L CHID1 IRF7 LOC143666 CRACR2B MIR210 DRD4 CEND1 TALDO1 SLC25A22 TSPAN4 EPS8L2 RPLP2 PNPLA2 HRAS LOC171391 LRRC56 SCT TMEM80 LOC101059906 RNH1 LMNTD2 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |