Assay Details
Target Gene Details
Entrez Gene ID: | 122618 |
Gene Name: | phospholipase D family member 4 |
Gene Aliases: |
C14orf175 |
Location: |
Chr.14:104924806-104937789 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 3 - Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PLD4 | NM_001308174.1 | NP_001295103.1 | ||
NM_138790.3 | NP_620145.2 | |||
XM_011536411.2 | XP_011534713.1 | |||
XM_017020965.1 | XP_016876454.1 | |||
AK295352.1 | ||||
AK296188.1 | ||||
AY358843.1 | AAQ89202.1 | |||
BC015003.1 | AAH15003.2 | |||
DC328186.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv566139 | Chr.14:104880959 - 104950810 on Build GRCh38 | Loss | CEP170B AHNAK2 PLD4 |
nsv566099 | Chr.14:104818822 - 104946204 on Build GRCh38 | Gain | CEP170B AHNAK2 PLD4 LINC00638 |
nsv952276 | Chr.14:104922864 - 105021963 on Build GRCh38 | Deletion | AHNAK2 PLD4 C14orf79 CDCA4 |
nsv1049253 | Chr.14:104918622 - 105005518 on Build GRCh38 | Gain | AHNAK2 PLD4 C14orf79 |
nsv1054574 | Chr.14:103210111 - 105365114 on Build GRCh38 | Loss | AKT1 EIF5 AHNAK2 INF2 LINC00638 SIVA1 KLC1 C14orf79 APOPT1 PPP1R13B ADSSL1 MIR6765 ZBTB42 LINC00637 PACS2 PLD4 NUDT14 LOC105370687 TDRD9 ASPG C14orf180 ZFYVE21 XRCC3 CDCA4 MARK3 C14orf2 BAG5 MIR203B RD3L TMEM179 LOC105370708 SNORA28 CKB JAG2 LOC107984648 CEP170B LOC105378183 KIF26A LOC105370691 MIR203A LOC101929634 GPR132 LOC102723354 MIR4710 LOC388022 BRF1 BTBD6 TRMT61A |
More Information
Additional Information:
For this assay, SNP(s) [rs539302406] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Non-exonic DGV Variation |