Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 11 - Exon 12 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | NP_848632.2 | ||
XM_017017654.1 | XP_016873143.1 | |||
AB089939.1 | BAD06471.1 | |||
BC131528.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | CDHR5 IRF7 LOC143666 PHRF1 IFITM2 PTDSS2 HRAS B4GALNT4 LMNTD2 PKP3 ANO9 MIR210HG IFITM1 MIR210 IFITM3 LRRC56 RASSF7 SIGIRR LOC101059906 IFITM5 RNH1 PGGHG |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | B4GALNT4 SIGIRR PKP3 ANO9 |
nsv1118197 | Chr.11:374500 - 377100 on Build GRCh38 | Deletion | B4GALNT4 |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | B4GALNT4 PKP3 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | PTDSS2 B4GALNT4 SIGIRR PKP3 ANO9 RNH1 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | B4GALNT4 SIGIRR PKP3 ANO9 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | IFITM2 ODF3 PTDSS2 NLRP6 B4GALNT4 SIRT3 PKP3 ANO9 BET1L IFITM1 IFITM3 PSMD13 SIGIRR MIR6743 IFITM5 PGGHG RIC8A |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | PTDSS2 B4GALNT4 SIGIRR PKP3 ANO9 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | CDHR5 PHRF1 DEAF1 SLC25A22 HRAS TALDO1 CHID1 ANO9 LOC171391 CEND1 PANO1 TMEM80 EPS8L2 RASSF7 RPLP2 SIGIRR LOC101059906 PDDC1 IRF7 LOC143666 PTDSS2 B4GALNT4 LMNTD2 TSPAN4 PKP3 CD151 MIR210HG MIR210 DRD4 LRRC56 PNPLA2 CRACR2B PIDD1 RNH1 AP2A2 SCT SNORA52 POLR2L |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |