Assay Details
Target Gene Details
Entrez Gene ID: | 79680 |
Gene Name: | chromosome 22 open reading frame 29 |
Gene Aliases: |
BOP |
Location: |
Chr.22:19846138-19854848 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C22orf29 | NM_024627.5 | 3 | 2908 | NP_078903.3 |
AL832509.1 | 3 | 2797 | ||
BX640785.1 | 2 | 2997 | CAE45875.1 | |
BX640969.1 | 3 | 2877 | CAE45984.1 | |
BX640998.1 | 3 | 2877 | CAE46001.1 |
Target Gene Details
Entrez Gene ID: | 54584 |
Gene Name: | G protein subunit beta 1 like |
Gene Aliases: |
DGCRK3, FKSG1, GY2, WDR14, WDVCF |
Location: |
Chr.22:19788411-19854939 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GNB1L | NM_053004.2 | NP_443730.1 | ||
AB051432.1 | ||||
AF238328.1 | AAG36826.1 | |||
AF301895.1 | AAG53933.1 | |||
AY007378.1 | AAG12162.1 | |||
BC012060.1 | AAH12060.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | TBX1 C22orf29 TXNRD2 GNB1L SEPT5-GP1BB GP1BB SEPT5 |
nsv953024 | Chr.22:19842078 - 19854877 on Build GRCh38 | Deletion | C22orf29 GNB1L |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | MIR3618 LOC440792 CDC45 MIR185 UFD1L TANGO2 CLDN5 DGCR6L LOC101927859 TXNRD2 TRMT2A MIR6816 SEPT5-GP1BB MIR1286 RANBP1 SEPT5 ARVCF LINC00896 TBX1 C22orf29 LOC284865 ZDHHC8 MIR4761 GP1BB DGCR8 MIR1306 CCDC188 GNB1L COMT RTN4R LINC00895 |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | MIR3618 LOC440792 MIR185 TANGO2 DGCR6L TXNRD2 TRMT2A MIR6816 SEPT5-GP1BB MIR1286 RANBP1 SEPT5 ARVCF LINC00896 TBX1 C22orf29 LOC284865 ZDHHC8 MIR4761 GP1BB DGCR8 MIR1306 CCDC188 GNB1L COMT RTN4R |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | MIR3618 LOC440792 MIR185 TANGO2 DGCR6L TXNRD2 TRMT2A MIR6816 SEPT5-GP1BB MIR1286 RANBP1 SEPT5 ARVCF LINC00896 TBX1 C22orf29 LOC284865 ZDHHC8 MIR4761 GP1BB DGCR8 MIR1306 CCDC188 GNB1L COMT RTN4R |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | C22orf29 TXNRD2 GNB1L |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | TBX1 C22orf29 TXNRD2 GNB1L |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | TBX1 C22orf29 TXNRD2 GNB1L SEPT5-GP1BB GP1BB SEPT5 |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | MIR3618 LINC00896 TBX1 LOC440792 C22orf29 LOC284865 ZDHHC8 MIR4761 MIR185 TANGO2 DGCR6L DGCR8 MIR1306 CCDC188 TXNRD2 GNB1L COMT TRMT2A RTN4R MIR6816 MIR1286 RANBP1 ARVCF |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | LINC01311 DGCR2 RIMBP3 CDC45 UFD1L CLTCL1 LOC100996401 DGCR14 CLDN5 MRPL40 LOC642643 GGT3P TXNRD2 FAM230A SLC25A1 TMEM191B LOC100996432 SEPT5-GP1BB DGCR11 TSSK2 PRODH SEPT5 TBX1 C22orf29 LOC100996415 PI4KAP1 DGCR5 MIR4761 HIRA LOC102725072 GP1BB DGCR9 LOC729461 DGCR6 C22orf39 DGCR10 GNB1L COMT GSC2 LINC00895 USP18 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |