Hs02323382_cn

• Gene Symbol: SAPCD2
• Assay Reference Genome Location: Chr.9:137065653 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 89958
• Gene Name: suppressor APC domain containing 2
• Gene Aliases: C9orf140, p42.3
• Location: Chr.9:137062127-137070576 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SAPCD2	NM_178448.3			NP_848543.2
	XM_011519180.2			XP_011517482.1
	BC048267.1			AAH48267.1
	DQ150361.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv13007n54	Chr.9:136966179 - 137173890 on Build GRCh38	Loss	ABCA2 TMEM210 PTGDS DPP7 PRR31 C9orf142 C9orf139 LCNL1 ENTPD2 MIR3621 UAP1L1 NPDC1 CLIC3 GRIN1 MAN1B1-AS1 MAN1B1 LOC101930307 LRRC26 SAPCD2 FUT7
nsv831761	Chr.9:137049674 - 137166473 on Build GRCh38	Loss	GRIN1 MAN1B1-AS1 MAN1B1 LOC101930307 SAPCD2 DPP7 ENTPD2 UAP1L1
nsv616006	Chr.9:137057859 - 137083633 on Build GRCh38	Loss	SAPCD2 UAP1L1
nsv524322	Chr.9:136795692 - 137482216 on Build GRCh38	Loss	RNF224 ABCA2 TPRN TRAF2 TOR4A ENTPD8 C9orf139 ANAPC2 ENTPD2 STPG3 NOXA1 GRIN1 MAN1B1-AS1 C8G NRARP PNPLA7 EXD3 C9orf172 RABL6 DPP7 CLIC3 TUBB4B SAPCD2 EDF1 CCDC183-AS1 NSMF CYSRT1 MAMDC4 TMEM210 PTGDS FBXW5 PRR31 C9orf142 PHPT1 MIR3621 NPDC1 MIR4292 SSNA1 MIR4479 SLC34A3 LRRC26 FUT7 RNF208 FAM166A LCNL1 NDOR1 UAP1L1 TMEM203 LCN12 MAN1B1 LOC101930307 CCDC183 C9orf173-AS1 NELFB MIR7114
nsv951206	Chr.9:136944849 - 137114548 on Build GRCh38	Deletion	ABCA2 PTGDS DPP7 PRR31 C9orf142 C9orf139 LCNL1 ENTPD2 UAP1L1 NPDC1 CLIC3 MAN1B1-AS1 LCN12 MAN1B1 LOC101930307 C8G SAPCD2 FUT7
nsv469918	Chr.9:136359865 - 137173890 on Build GRCh38	Loss	LCN15 ABCA2 C9orf163 TRAF2 AGPAT2 PMPCA LCN8 TMEM141 C9orf139 ENTPD2 LCN6 GRIN1 MAN1B1-AS1 LINC01451 SNAPC4 SNHG7 C8G FAM69B DNLZ INPP5E C9orf172 RABL6 DPP7 MIR126 CLIC3 SAPCD2 EDF1 CCDC183-AS1 MAMDC4 MIR6722 MIR4674 TMEM210 SNORA17A PTGDS FBXW5 PRR31 C9orf142 PHPT1 MIR3621 NPDC1 MIR4292 MIR4673 SEC16A HSPC324 MIR4479 NOTCH1 LRRC26 FUT7 EGFL7 LCNL1 LCN10 UAP1L1 SDCCAG3 SNORA17B LCN12 MAN1B1 LOC101930307 CCDC183 CARD9 LOC100128593 NALT1
nsv616005	Chr.9:137036493 - 137173890 on Build GRCh38	Loss	TMEM210 DPP7 C9orf139 ENTPD2 MIR3621 UAP1L1 NPDC1 GRIN1 MAN1B1-AS1 MAN1B1 LOC101930307 LRRC26 SAPCD2
esv2761561	Chr.9:137030185 - 137191593 on Build GRCh38	Gain	TMEM210 DPP7 C9orf139 ANAPC2 ENTPD2 MIR3621 UAP1L1 NPDC1 GRIN1 MAN1B1-AS1 MAN1B1 SSNA1 LOC101930307 LRRC26 SAPCD2 FUT7
esv2422220	Chr.9:136584135 - 137350098 on Build GRCh38	Deletion	LCN15 RNF224 ABCA2 TPRN TRAF2 TOR4A AGPAT2 LCN8 TMEM141 C9orf139 ANAPC2 ENTPD2 STPG3 LCN6 GRIN1 MAN1B1-AS1 LINC01451 SNHG7 C8G NRARP FAM69B EXD3 C9orf172 RABL6 DPP7 MIR126 CLIC3 TUBB4B SAPCD2 EDF1 CCDC183-AS1 CYSRT1 MAMDC4 MIR6722 TMEM210 SNORA17A PTGDS FBXW5 PRR31 C9orf142 PHPT1 MIR3621 NPDC1 MIR4292 SSNA1 HSPC324 MIR4479 SLC34A3 LRRC26 FUT7 RNF208 FAM166A EGFL7 LCNL1 LCN10 NDOR1 UAP1L1 TMEM203 SNORA17B LCN12 MAN1B1 LOC101930307 CCDC183 LOC100128593 C9orf173-AS1 NELFB
nsv982354	Chr.9:137057355 - 137073859 on Build GRCh38	Duplication	SAPCD2

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation