Assay Details
Target Gene Details
Entrez Gene ID: | 79680 |
Gene Name: | chromosome 22 open reading frame 29 |
Gene Aliases: |
BOP |
Location: |
Chr.22:19846138-19854848 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C22orf29 | NM_024627.5 | 3 | 579 | NP_078903.3 |
AK291262.1 | 3 | 547 | ||
AL832509.1 | 3 | 468 | ||
BC011679.2 | 1 | 86 | AAH11679.2 | |
BX640785.1 | 2 | 668 | CAE45875.1 | |
BX640969.1 | 3 | 548 | CAE45984.1 | |
BX640998.1 | 3 | 548 | CAE46001.1 | |
DA182195.1 | ||||
DA757523.1 |
Target Gene Details
Entrez Gene ID: | 54584 |
Gene Name: | G protein subunit beta 1 like |
Gene Aliases: |
DGCRK3, FKSG1, GY2, WDR14, WDVCF |
Location: |
Chr.22:19788411-19854939 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GNB1L | NM_053004.2 | NP_443730.1 | ||
AB051432.1 | ||||
AF238328.1 | AAG36826.1 | |||
AF301895.1 | AAG53933.1 | |||
AY007378.1 | AAG12162.1 | |||
BC012060.1 | AAH12060.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | SEPT5-GP1BB GP1BB C22orf29 TBX1 SEPT5 GNB1L TXNRD2 |
nsv953024 | Chr.22:19842078 - 19854877 on Build GRCh38 | Deletion | C22orf29 GNB1L |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | MIR6816 MIR1306 MIR3618 TRMT2A LOC101927859 ARVCF MIR4761 MIR185 DGCR8 RTN4R LINC00896 SEPT5-GP1BB CCDC188 C22orf29 TBX1 RANBP1 LINC00895 LOC440792 GP1BB TANGO2 MIR1286 CDC45 SEPT5 UFD1L CLDN5 TXNRD2 COMT DGCR6L ZDHHC8 GNB1L LOC284865 |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | MIR6816 MIR1306 MIR3618 TRMT2A ARVCF MIR4761 MIR185 DGCR8 RTN4R LINC00896 SEPT5-GP1BB CCDC188 C22orf29 TBX1 RANBP1 LOC440792 GP1BB TANGO2 MIR1286 SEPT5 TXNRD2 COMT DGCR6L ZDHHC8 GNB1L LOC284865 |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | MIR6816 MIR1306 MIR3618 TRMT2A ARVCF MIR4761 MIR185 DGCR8 RTN4R LINC00896 SEPT5-GP1BB CCDC188 C22orf29 TBX1 RANBP1 LOC440792 GP1BB TANGO2 MIR1286 SEPT5 TXNRD2 COMT DGCR6L ZDHHC8 GNB1L LOC284865 |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | C22orf29 GNB1L TXNRD2 |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | C22orf29 TBX1 GNB1L TXNRD2 |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | SEPT5-GP1BB GP1BB C22orf29 TBX1 SEPT5 GNB1L TXNRD2 |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | MIR6816 MIR1306 MIR3618 LOC440792 TRMT2A ARVCF TANGO2 MIR1286 MIR4761 MIR185 DGCR8 RTN4R TXNRD2 COMT DGCR6L LINC00896 CCDC188 C22orf29 TBX1 RANBP1 ZDHHC8 GNB1L LOC284865 |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | FAM230A LOC100996401 PI4KAP1 LOC102725072 MIR4761 RIMBP3 DGCR14 LOC729461 PRODH GGT3P DGCR11 SEPT5-GP1BB C22orf39 TSSK2 LOC100996415 C22orf29 TBX1 TMEM191B DGCR2 LINC00895 LOC642643 DGCR10 SLC25A1 GP1BB USP18 MRPL40 CDC45 SEPT5 UFD1L CLDN5 LOC100996432 TXNRD2 COMT DGCR5 DGCR6 HIRA LINC01311 DGCR9 CLTCL1 GNB1L GSC2 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |