Assay Details

Target Gene Details

Entrez Gene ID:	50937
Gene Name:	cell adhesion associated, oncogene regulated
Gene Aliases:	CDO, CDON1, HPE11, ORCAM
Location:	Chr.11:125956813-126063335 on Build GRCh38
Assay Gene Location:	Within Exon 23

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CDON	NM_001243597.1	20	6134	NP_001230526.1
	NM_016952.4	20	6065	NP_058648.4
	XM_011542862.2	20	6295	XP_011541164.1
	XM_011542863.2	20	6299	XP_011541165.1
	XM_011542864.2	20	6212	XP_011541166.1
	XM_011542865.2	20	6095	XP_011541167.1
	XM_011542866.2	20	6226	XP_011541168.1
	XM_017017873.1	20	6131	XP_016873362.1
	AB209396.1	11	4454	BAD92633.1
	AK022986.1	1	1307

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv535	Chr.11:125918491 - 125963371 on Build GRCh38	Deletion	CDON DDX25 LOC338667
nsv556525	Chr.11:125690285 - 125971104 on Build GRCh38	Gain	PATE1 CDON PUS3 PATE4 PATE2 DDX25 HYLS1 LOC105369553 LOC338667 PATE3
esv32964	Chr.11:125495069 - 126046387 on Build GRCh38	Gain+Loss	PATE1 CDON CHEK1 PUS3 STT3A PATE4 DDX25 ACRV1 LOC338667 PATE3 EI24 FEZ1 LOC403312 STT3A-AS1 PATE2 HYLS1 LOC105369553

More Information

Additional Information:

For this assay, SNP(s) [rs76179044] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

Intragenic

Exonic

DGV Variation

Gene Ontology Categories:

Function(s) Process(es)

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System Message

Genomic Map

Assay Details

Target Gene Details

Entrez Gene ID:

Gene Name:

Gene Aliases:

Location:

Assay Gene Location: