Assay Details
Target Gene Details
Entrez Gene ID: | 23645 |
Gene Name: | protein phosphatase 1 regulatory subunit 15A |
Gene Aliases: |
GADD34 |
Location: |
Chr.19:48872392-48876062 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PPP1R15A | NM_014330.3 | 3 | 2127 | NP_055145.3 |
AK001361.1 | 3 | 2098 | BAA91649.1 | |
AK225632.1 | 3 | 2098 | ||
AK296668.1 | 4 | 1621 | ||
AK297615.1 | 4 | 2015 | ||
AK298765.1 | 3 | 1412 | ||
BC003067.2 | 3 | 2080 | AAH03067.1 | |
CR457259.1 | 2 | 1858 | CAG33540.1 | |
U83981.1 | 3 | 2080 | AAC25631.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | PLEKHA4 CA11 SNAR-C5 RUVBL2 C19orf73 CGB8 SNAR-A7 NUCB1 MIR4324 SIGLEC16 RPL13A FLT3LG SPACA4 GRIN2D SNAR-A4 FUT1 FLJ26850 PTH2 SNAR-C2 TULP2 LIG1 SNAR-C4 SNAR-B1 AP2A1 SCAF1 MIR5088 FAM83E FGF21 AKT1S1 RCN3 EMP3 SNAR-A3 NUP62 SNAR-A11 SNAR-A14 SNAR-B2 SNRNP70 RRAS FUT2 MIR6800 SNORD33 PPFIA3 MIR4751 BAX CGB7 PRR12 PTOV1-AS1 KCNA7 BCAT2 SNAR-D SULT2B1 IRF3 HRC ELSPBP1 CCDC155 PRMT1 MIR6798 SNAR-A1 ZNF114 CGB1 NOSIP ATF5 MED25 PNKP TBC1D17 LOC101059948 BCL2L12 NTF4 MIR4749 CARD8 DKKL1 MIR150 RASIP1 LHB SNORD35A MAMSTR SNAR-G2 C19orf68 SEC1P PTOV1-AS2 SNAR-A8 SNAR-A6 LOC101928295 SNAR-A5 CARD8-AS1 SNORD35B KDELR1 GRWD1 ALDH16A1 CD37 TRPM4 LIN7B PLA2G4C SNAR-A10 RPS11 FTL LOC100287477 CGB2 MIR4750 ZNF473 GYS1 SNAR-A12 ADM5 RPL18 LMTK3 LOC105372430 CCDC114 SNAR-C3 SYNGR4 CYTH2 TEAD2 SNAR-C1 SIGLEC11 GFY NTN5 CGB5 PTOV1 TMEM143 SPHK2 LOC105447645 CPT1C DHDH KCNJ14 CABP5 PIH1D1 SNAR-A13 SNAR-G1 CGB3 IZUMO1 VRK3 SNAR-A9 PPP1R15A SNORD32A FCGRT DBP MIR6799 SNAR-A2 TSKS SLC17A7 IL4I1 NUCB1-AS1 PRRG2 SNORD34 PLA2G4C-AS1 FUZ HSD17B14 BSPH1 SLC6A16 |
nsv470148 | Chr.19:48865586 - 48906934 on Build GRCh38 | Gain | PLEKHA4 PPP1R15A TULP2 NUCB1 |
nsv833856 | Chr.19:48847866 - 48986483 on Build GRCh38 | Loss | PLEKHA4 FTL NUCB1-AS1 PPP1R15A TULP2 GYS1 DHDH NUCB1 BAX |
nsv833855 | Chr.19:48750098 - 48949781 on Build GRCh38 | Loss | PLEKHA4 BCAT2 NUCB1-AS1 PPP1R15A TULP2 DHDH HSD17B14 NUCB1 FGF21 FUT1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |