Assay Details
Target Gene Details
Entrez Gene ID: | 57447 |
Gene Name: | NDRG family member 2 |
Gene Aliases: |
SYLD |
Location: |
Chr.14:21016763-21070872 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
NDRG2 | NM_001282211.1 | NP_001269140.1 | ||
AK293514.1 |
Target Gene Details
Entrez Gene ID: | 440163 |
Gene Name: | ribonuclease A family member 13 (inactive) |
Gene Aliases: |
HEL-S-86p, RAL1 |
Location: |
Chr.14:21032820-21034785 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RNASE13 | NM_001012264.3 | 2 | 449 | NP_001012264.1 |
AY665808.1 | 1 | 311 | AAV87186.1 | |
BC044831.1 | 2 | 449 | AAH44831.1 | |
FJ237363.1 | 2 | 449 |
Target Gene Details
Entrez Gene ID: | 122664 |
Gene Name: | tubulin polymerization promoting protein family member 2 |
Gene Aliases: |
C14orf8, CT152, P18, p25beta |
Location: |
Chr.14:21024262-21036352 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TPPP2 | XM_011536416.1 | XP_011534718.1 | ||
XM_011536420.2 | XP_011534722.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv428293 | Chr.14:20747949 - 21063624 on Build GRCh38 | Gain+Loss | ARHGEF40 RNASE3 RNASE7 METTL17 EDDM3A RNASE1 EDDM3B TPPP2 RNASE13 RNASE8 RNASE2 RNASE6 SLC39A2 LOC101929718 ECRP MIR6717 NDRG2 |
nsv832740 | Chr.14:20863901 - 21076893 on Build GRCh38 | Gain | ARHGEF40 RNASE3 RNASE7 METTL17 TPPP2 RNASE13 RNASE8 RNASE2 SLC39A2 LOC101929718 ECRP MIR6717 NDRG2 |
nsv1039369 | Chr.14:21030895 - 21062142 on Build GRCh38 | Loss | ARHGEF40 TPPP2 RNASE13 RNASE8 RNASE7 NDRG2 |
More Information
Additional Information:
For this assay, SNP(s) [rs114504351] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |