Assay Details
Target Gene Details
Entrez Gene ID: | 6519 |
Gene Name: | solute carrier family 3 member 1 |
Gene Aliases: |
ATR1, CSNU1, D2H, NBAT, RBAT |
Location: |
Chr.2:44275458-44320824 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC3A1 | NM_000341.3 | 2 | 644 | NP_000332.2 |
XM_011533047.2 | 2 | 644 | XP_011531349.1 | |
AB033549.1 | 2 | 625 | BAB16841.1 | |
AK091932.1 | 3 | 510 | ||
AK223146.1 | 2 | 606 | BAD96866.1 | |
AK289636.1 | 2 | 622 | ||
AK309145.1 | 2 | 638 | ||
AK313157.1 | 2 | 638 | ||
BC022386.1 | 2 | 642 | AAH22386.1 | |
BC093624.1 | 2 | 603 | AAH93624.1 | |
BC093626.1 | 2 | 598 | AAH93626.1 | |
DQ023513.1 | 2 | 566 | AAY89644.1 | |
DQ023515.1 | 2 | 566 | AAY89646.1 | |
DQ023516.1 | 2 | 566 | AAY89647.1 | |
DQ023517.1 | 2 | 566 | AAY89648.1 | |
KU178335.1 | 2 | 566 | ||
KU178336.1 | ||||
L11696.1 | 2 | 609 | AAA81778.1 | |
M95548.1 | 2 | 610 | AAA35500.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv3798n100 | Chr.2:44279994 - 44404126 on Build GRCh38 | Loss | SLC3A1 PREPL CAMKMT |
dgv6837n54 | Chr.2:44278046 - 44351759 on Build GRCh38 | Loss | SLC3A1 PREPL |
esv3583768 | Chr.2:44279853 - 44284604 on Build GRCh38 | Loss | SLC3A1 |
nsv1006405 | Chr.2:44013164 - 44709137 on Build GRCh38 | Loss | SLC3A1 PREPL PPM1B CAMKMT |
nsv1011655 | Chr.2:44278899 - 44344334 on Build GRCh38 | Loss | SLC3A1 PREPL |
nsv521399 | Chr.2:44280074 - 44317775 on Build GRCh38 | Loss | SLC3A1 PREPL |
nsv457196 | Chr.2:44276990 - 44339733 on Build GRCh38 | Gain | SLC3A1 PREPL |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |