Assay Details
Target Gene Details
Entrez Gene ID: | 58191 |
Gene Name: | C-X-C motif chemokine ligand 16 |
Gene Aliases: |
CXCLG16, SR-PSOX, SRPSOX |
Location: |
Chr.17:4733529-4739928 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 1 - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CXCL16 | NM_001100812.1 | NP_001094282.1 | ||
NM_022059.3 | NP_071342.2 | |||
AF275260.1 | AAG31750.1 | |||
AF301016.1 | AAG34365.1 | |||
AF337812.1 | AAK38275.1 | |||
AK027389.1 | BAB55078.1 | |||
AK292114.1 | ||||
AK315017.1 | ||||
AY358909.1 | AAQ89268.1 | |||
BC017588.1 | AAH17588.1 | |||
BC044930.1 | AAH44930.1 | |||
JC209418.1 | ||||
JC209420.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain | MIR6864 VMO1 NUP88 ZNF594 SLC52A1 LOC101928000 C1QBP C17orf107 ZMYND15 CXCL16 PSMB6 PFN1 ARRB2 INCA1 ZNF232 TM4SF5 PLD2 SCIMP GLTPD2 USP6 LOC107984973 PELP1 LOC102724009 LOC101927979 MIR6865 RPAIN MED11 SMTNL2 SPAG7 RABEP1 CHRNE CAMTA2 LOC100130950 MINK1 SLC25A11 GP1BA ENO3 ALOX15 ZFP3 DHX33 RNF167 LOC101559451 KIF1C LOC400568 |
nsv833346 | Chr.17:4646256 - 4860871 on Build GRCh38 | Loss | GLTPD2 VMO1 LOC107984973 PELP1 MED11 ZMYND15 CXCL16 MINK1 PSMB6 ARRB2 LOC101559451 TM4SF5 PLD2 |
nsv1952 | Chr.17:4726245 - 4748889 on Build GRCh38 | Insertion | ZMYND15 CXCL16 MED11 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |