Assay Details
Target Gene Details
Entrez Gene ID: | 146712 |
Gene Name: | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 |
Gene Aliases: |
3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1 |
Location: |
Chr.17:82942149-83051845 on Build GRCh38 |
Assay Gene Location: | Within Exon 20 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B3GNTL1 | NM_001009905.2 | 13 | 2583 | NP_001009905.1 |
NM_001320742.1 | 14 | 2701 | NP_001307671.1 | |
NM_001320743.1 | 9 | 3178 | NP_001307672.1 | |
NR_135465.1 | 14 | 2938 | ||
NR_135466.1 | 10 | 2010 | ||
AK054757.1 | 10 | 2010 | ||
BU623325.1 | 1 | 453 |
Target Gene Details
Entrez Gene ID: | 6904 |
Gene Name: | tubulin folding cofactor D |
Gene Aliases: |
SSD-1, tfcD |
Location: |
Chr.17:82752048-82943186 on Build GRCh38 |
Assay Gene Location: | Within Exon 56 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1067553 | Chr.17:82530808 - 83091923 on Build GRCh38 | Loss | LOC105376791 B3GNTL1 RAB40B ZNF750 FOXK2 FN3K WDR45B METRNL LOC105371944 MIR4525 TBCD FN3KRP LOC101929552 |
dgv3296n100 | Chr.17:82851564 - 83091923 on Build GRCh38 | Gain | METRNL LOC105371944 TBCD B3GNTL1 |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | SLC16A3 CSNK1D PYCR1 SECTM1 PCYT2 FASN ZNF750 FAAP100 CCDC57 RFNG RAC3 MYADML2 WDR45B ACTG1 MAFG TSPAN10 GPS1 NPB P4HB HEXDC TMEM105 SNORD134 C17orf62 PDE6G LOC105371925 OXLD1 NPLOC4 B3GNTL1 RAB40B SLC38A10 STRA13 ASPSCR1 LOC101929511 C17orf89 BAHCC1 UTS2R FN3KRP LOC105376790 AATK CD7 LOC105376791 GCGR LRRC45 FN3K ALYREF DUS1L MIR4525 TBCD ANAPC11 MIR6786 LOC100130370 CCDC137 FSCN2 MCRIP1 TEPSIN OGFOD3 HGS NARF MIR6787 NOTUM CEP131 MRPL12 SLC25A10 TEX19 FOXK2 ARHGDIA MIR3186 MAFG-AS1 MIR4740 LOC105371944 SIRT7 PPP1R27 AATK-AS1 LOC101929552 DCXR ARL16 LINC00482 |
nsv576217 | Chr.17:82937869 - 82960820 on Build GRCh38 | Loss | LOC105371944 TBCD B3GNTL1 |
dgv3297n100 | Chr.17:82879855 - 83048753 on Build GRCh38 | Gain | LOC105371944 TBCD B3GNTL1 |
esv3893052 | Chr.17:82895301 - 83102003 on Build GRCh38 | Gain | METRNL LOC105371944 TBCD B3GNTL1 |
nsv1057153 | Chr.17:82876571 - 83091923 on Build GRCh38 | Loss | METRNL LOC105371944 TBCD B3GNTL1 |
esv21913 | Chr.17:81828123 - 83103548 on Build GRCh38 | Gain+Loss | SLC16A3 CSNK1D PYCR1 SECTM1 PCYT2 FASN ZNF750 CCDC57 RFNG RAC3 MYADML2 WDR45B METRNL MAFG GPS1 NPB P4HB HEXDC SNORD134 C17orf62 B3GNTL1 RAB40B STRA13 ASPSCR1 LOC101929511 UTS2R FN3KRP LOC105376790 CD7 LOC105376791 LRRC45 FN3K ALYREF DUS1L MIR4525 TBCD ANAPC11 MCRIP1 OGFOD3 NARF MIR6787 NOTUM TEX19 FOXK2 ARHGDIA MAFG-AS1 LOC105371944 SIRT7 PPP1R27 LOC101929552 DCXR |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |