Assay Details
Target Gene Details
Entrez Gene ID: | 3897 |
Gene Name: | L1 cell adhesion molecule |
Gene Aliases: |
CAML1, CD171, HSAS, HSAS1, MASA, MIC5, N-CAM-L1, N-CAML1, NCAM-L1, S10, SPG1 |
Location: |
Chr.X:153861514-153886174 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
L1CAM | NM_001278116.1 | NP_001265045.1 | ||
DA122729.1 |
Target Gene Details
Entrez Gene ID: | 100996465 |
Gene Name: | lung carcinoma-associated 10 |
Gene Aliases: |
LCAP |
Location: |
Chr.X:153880672-153888990 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LCA10 | NR_130768.1 | 2 | 168 | |
AF514420.1 | 2 | 168 | AAQ08117.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv33199 | Chr.X:153065734 - 154591978 on Build GRCh38 | Gain+Loss | FAM223A MIR6858 LOC107987332 SSR4 ABCD1 IRAK1 MIR3202-1 PLXNA3 OPN1MW LOC105373381 TAZ ZNF275 TMEM187 SLC6A8 SLC10A3 LCA10 CH17-340M24.3 LOC107983954 BCAP31 OPN1LW LOC105373383 MIR3202-2 ATP2B3 LOC105373377 RPL10 MIR718 PDZD4 FAM50A RENBP LOC105373378 GDI1 DUSP9 CTAG1A TKTL1 EMD TREX2 PLXNB3 FLNA TEX28 BGN G6PD UBL4A OPN1MW2 L1CAM HCFC1-AS1 SRPK3 HCFC1 ATP6AP1 ZFP92 ARHGAP4 OPN1MW3 PNCK IDH3G LOC105373386 SNORA70 HAUS7 AVPR2 LAGE3 FAM58A MECP2 MAGEA1 PNMA6A FAM3A IKBKG NAA10 DNASE1L1 |
nsv469867 | Chr.X:153813281 - 154018926 on Build GRCh38 | Loss | HCFC1 PDZD4 TMEM187 RENBP ARHGAP4 LCA10 AVPR2 IRAK1 MIR3202-1 NAA10 L1CAM HCFC1-AS1 MIR3202-2 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |