Assay Details
Target Gene Details
Entrez Gene ID: | 5439 |
Gene Name: | RNA polymerase II subunit J |
Gene Aliases: |
POLR2J1, RPB11, RPB11A, RPB11m, hRPB14 |
Location: |
Chr.7:102473100-102478999 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
POLR2J | NM_006234.4 | 4 | 571 | NP_006225.1 |
XM_005250452.4 | XP_005250509.1 | |||
XM_017012353.1 | XP_016867842.1 | |||
AK290515.1 | ||||
BC024165.1 | AAH24165.1 | |||
BC065711.1 | 4 | 549 | AAH65711.1 | |
BC139902.1 | ||||
BC141830.1 | ||||
BM545237.1 | ||||
BM791979.1 | 2 | 223 | ||
L37127.1 | AAD05361.1 | |||
X82385.1 | CAA57785.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv831083 | Chr.7:102340560 - 102655422 on Build GRCh38 | Loss |
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nsv482111 | Chr.7:102473103 - 102478934 on Build GRCh38 | Gain |
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dgv11541n54 | Chr.7:102473462 - 102646638 on Build GRCh38 | Loss |
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nsv8192 | Chr.7:102450605 - 102692752 on Build GRCh38 | Gain |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
esv27624 | Chr.7:102472919 - 102691417 on Build GRCh38 | Gain+Loss |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
nsv428182 | Chr.7:102257460 - 102735503 on Build GRCh38 | Gain |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
dgv6538n100 | Chr.7:102171110 - 103063688 on Build GRCh38 | Gain |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
nsv607998 | Chr.7:102385213 - 102473462 on Build GRCh38 | Gain+Loss |
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nsv5879 | Chr.7:102450321 - 102747356 on Build GRCh38 | Deletion |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
nsv607999 | Chr.7:102451288 - 102473452 on Build GRCh38 | Loss |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs576255328] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Molecular Function -
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_next.png)
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_next.png)
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)