Assay Details
Target Gene Details
Entrez Gene ID: | 90835 |
Gene Name: | coiled-coil domain containing 189 |
Gene Aliases: |
C16orf93 |
Location: |
Chr.16:30757226-30762277 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CCDC189 | NM_001014979.2 | 1 | 540 | NP_001014979.2 |
NM_001195620.1 | 1 | 540 | NP_001182549.1 | |
XM_011545976.1 | 1 | 573 | XP_011544278.1 | |
XM_011545978.1 | 1 | 573 | XP_011544280.1 | |
XM_017023852.1 | 1 | 573 | XP_016879341.1 | |
XM_017023853.1 | 1 | 573 | XP_016879342.1 | |
XM_017023854.1 | 1 | 573 | XP_016879343.1 | |
XM_017023855.1 | 1 | 573 | XP_016879344.1 | |
XM_017023856.1 | XP_016879345.1 | |||
XM_017023857.1 | 1 | 435 | XP_016879346.1 | |
XM_017023858.1 | 1 | 573 | XP_016879347.1 | |
XM_017023859.1 | 1 | 573 | XP_016879348.1 | |
XM_017023861.1 | 1 | 573 | XP_016879350.1 | |
XM_017023862.1 | 1 | 435 | XP_016879351.1 | |
AK307279.1 | 1 | 383 | ||
AL122109.2 | 1 | 494 | ||
BC092491.1 | 1 | 517 | AAH92491.1 | |
BC128128.1 | ||||
BC128129.1 | ||||
BI829598.1 | 1 | 540 |
Target Gene Details
Entrez Gene ID: | 9810 |
Gene Name: | ring finger protein 40 |
Gene Aliases: |
BRE1B, RBP95, STARING |
Location: |
Chr.16:30761612-30800231 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RNF40 | NM_001207033.1 | 1 | 94 | NP_001193962.1 |
NM_001207034.1 | 1 | 94 | NP_001193963.1 | |
NM_014771.3 | 1 | 94 | NP_055586.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv469724 | Chr.16:30621124 - 30828942 on Build GRCh38 | Loss | LOC730183 SRCAP PRR14 PHKG2 FBRS CCDC189 RNF40 TMEM265 ZNF629 SNORA30 |
nsv9438 | Chr.16:30758882 - 30788121 on Build GRCh38 | Gain | PHKG2 CCDC189 RNF40 ZNF629 |
nsv833188 | Chr.16:30621125 - 30828942 on Build GRCh38 | Loss | LOC730183 SRCAP PRR14 PHKG2 FBRS CCDC189 RNF40 TMEM265 ZNF629 SNORA30 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |