Assay Details
Target Gene Details
Entrez Gene ID: | 4849 |
Gene Name: | CCR4-NOT transcription complex subunit 3 |
Gene Aliases: |
LENG2, NOT3, NOT3H |
Location: |
Chr.19:54137689-54155708 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 10 - Exon 11 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNOT3 | NM_014516.3 | NP_055331.1 | ||
XM_005278279.1 | XP_005278336.1 | |||
XM_005278280.2 | XP_005278337.1 | |||
XM_005278281.1 | XP_005278338.1 | |||
XM_005278282.2 | XP_005278339.1 | |||
XM_011526992.1 | XP_011525294.1 | |||
XM_011526993.2 | XP_011525295.1 | |||
AB014591.1 | ||||
AF180474.1 | AAF29828.1 | |||
AK160386.1 | BAD18729.1 | |||
AK300434.1 | ||||
AL133647.1 | CAB63766.1 | |||
BC016474.1 | AAH16474.1 | |||
BM781759.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3644782 | Chr.19:54138064 - 54154026 on Build GRCh38 | Gain | CNOT3 |
nsv515623 | Chr.19:54102901 - 54179150 on Build GRCh38 | Loss | MBOAT7 TFPT CNOT3 TMC4 LENG1 NDUFA3 PRPF31 |
nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion | MBOAT7 TFPT CNOT3 TMC4 OSCAR LENG1 NDUFA3 TSEN34 PRPF31 |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | CACNG8 MIR518C MIR518D ZNF765 NDUFA3 LILRB5 MIR526B MIR520E BIRC8 CACNG7 MIR524 VSTM1 MIR520C MIR517C MIR519D MIR516A1 CNOT3 DPRX ZNF331 MIR521-1 MIR520F MIR523 LILRB3 MIR518A1 MIR526A2 VN1R2 OSCAR RPS9 MIR512-2 MIR519E TARM1 MIR516B2 MIR520D TMC4 NLRP12 LILRA6 ZNF525 ZNF761 MIR498 MIR371A MIR515-2 MIR518A2 MIR373 LILRB2 ZNF677 MIR1283-2 ZNF845 ZNF813 MIR1323 MIR935 MIR516A2 MYADM MIR520B TPM3P9 MIR519B LILRA5 ZNF665 TFPT MIR4752 MIR372 LENG1 LOC284379 TSEN34 MIR1283-1 FAM90A27P MIR520H ZNF818P LOC105372457 MIR519C MIR522 MIR518E MIR521-2 CACNG6 MIR526A1 MIR512-1 MIR518F MIR525 VN1R4 PRPF31 MIR517A MIR520A MIR519A2 MIR516B1 MIR517B MIR518B MIR515-1 MIR527 MBOAT7 MIR520G MIR519A1 PRKCG MIR371B |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |