Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 6 - Exon 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | NP_848632.2 | ||
XM_017017654.1 | XP_016873143.1 | |||
AB089939.1 | BAD06471.1 | |||
BC131528.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | HRAS LOC101059906 PTDSS2 LOC143666 IFITM5 IFITM2 IFITM1 ANO9 RASSF7 PGGHG LRRC56 PHRF1 B4GALNT4 IFITM3 MIR210 LMNTD2 CDHR5 SIGIRR RNH1 MIR210HG PKP3 IRF7 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | B4GALNT4 ANO9 SIGIRR PKP3 |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | B4GALNT4 PKP3 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | B4GALNT4 PTDSS2 ANO9 SIGIRR RNH1 PKP3 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | B4GALNT4 ANO9 SIGIRR PKP3 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | PTDSS2 IFITM5 ODF3 IFITM2 IFITM1 ANO9 PSMD13 BET1L PGGHG RIC8A B4GALNT4 IFITM3 MIR6743 SIGIRR NLRP6 SIRT3 PKP3 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | B4GALNT4 PTDSS2 ANO9 SIGIRR PKP3 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | PIDD1 HRAS LOC101059906 LOC171391 SCT RASSF7 TMEM80 LRRC56 PDDC1 B4GALNT4 MIR210 EPS8L2 SLC25A22 CD151 RNH1 PNPLA2 POLR2L PTDSS2 LOC143666 ANO9 SNORA52 CEND1 TSPAN4 CHID1 PHRF1 TALDO1 PANO1 CRACR2B RPLP2 LMNTD2 CDHR5 AP2A2 DEAF1 DRD4 SIGIRR MIR210HG PKP3 IRF7 |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |