Assay Details
Target Gene Details
Entrez Gene ID: | 126133 |
Gene Name: | aldehyde dehydrogenase 16 family member A1 |
Gene Aliases: |
- |
Location: |
Chr.19:49453216-49471050 on Build GRCh38 |
Assay Gene Location: | Within Exon 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ALDH16A1 | NM_001145396.1 | 14 | 2027 | NP_001138868.1 |
NM_153329.3 | 15 | 2180 | NP_699160.2 | |
XM_011526441.1 | 15 | 1998 | XP_011524743.1 | |
XM_011526442.1 | 15 | 2015 | XP_011524744.1 | |
AK074136.1 | 14 | 2210 | BAB84962.1 | |
AK297101.1 | 14 | 2010 | ||
AK298587.1 | 12 | 1762 | ||
AK301246.1 | 13 | 1878 | ||
AY007096.1 | 8 | 1113 | ||
BC014895.2 | 15 | 2140 | AAH14895.2 | |
BC035641.1 | 2 | 307 | AAH35641.1 | |
BC042142.1 | 8 | 1103 | AAH42142.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | SLC17A7 SNAR-A5 PTOV1-AS2 LOC101059948 CGB7 LMTK3 ELSPBP1 ZNF473 ATF5 RPS11 BAX MED25 DKKL1 CGB3 PLA2G4C SPHK2 TULP2 FUT2 ALDH16A1 SNAR-A1 GYS1 ADM5 SNORD35B FLJ26850 SNAR-B2 CGB5 SNAR-C1 LOC100287477 SIGLEC16 TSKS CYTH2 SNAR-C5 EMP3 KCNJ14 NUCB1 DBP GFY RRAS SPACA4 CGB2 PLA2G4C-AS1 SNAR-A10 SNAR-D KDELR1 ZNF114 AKT1S1 SULT2B1 HRC PNKP FLT3LG CGB1 MIR5088 IL4I1 CA11 CCDC114 GRWD1 LIN7B SNAR-A4 PPFIA3 TEAD2 TMEM143 MAMSTR LOC101928295 SNRNP70 SNAR-A14 SNAR-A3 BCL2L12 SNAR-A2 TRPM4 SNAR-G2 PRMT1 SNORD34 NTN5 SLC6A16 LOC105372430 FCGRT MIR6800 PTOV1 MIR4751 SCAF1 CARD8-AS1 RUVBL2 MIR6798 TBC1D17 CABP5 C19orf73 LHB RPL13A DHDH IRF3 SNAR-A12 C19orf68 NTF4 LIG1 NUCB1-AS1 SNAR-C2 KCNA7 SNAR-G1 SNAR-B1 HSD17B14 IZUMO1 SNAR-C3 SNAR-A8 SNORD35A MIR4324 FUT1 SIGLEC11 VRK3 SYNGR4 PRRG2 PLEKHA4 MIR4750 SNORD32A PPP1R15A SNAR-A13 SNAR-A11 PRR12 AP2A1 NOSIP RPL18 MIR4749 SEC1P LOC105447645 SNAR-A9 FUZ BCAT2 SNAR-A6 CPT1C SNORD33 PIH1D1 PTOV1-AS1 RCN3 NUP62 SNAR-C4 GRIN2D MIR6799 FGF21 RASIP1 PTH2 FAM83E FTL CCDC155 CD37 SNAR-A7 CARD8 MIR150 BSPH1 CGB8 |
nsv833862 | Chr.19:49448789 - 49570676 on Build GRCh38 | Loss | SNORD34 SNORD33 PIH1D1 RCN3 FCGRT SNORD32A RPS11 NOSIP FLT3LG SNORD35A MIR150 ALDH16A1 RPL13A SNORD35B |
esv3644624 | Chr.19:49461676 - 49475440 on Build GRCh38 | Gain | FLT3LG ALDH16A1 |
nsv953599 | Chr.19:49386444 - 49506743 on Build GRCh38 | Deletion | SNORD34 SLC17A7 SNORD33 PIH1D1 SNORD32A PTH2 RPS11 LOC101928295 CCDC155 FLT3LG SNORD35A MIR150 ALDH16A1 RPL13A SNORD35B GFY |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |