Assay Details
Target Gene Details
Entrez Gene ID: | 2583 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 1 |
Gene Aliases: |
GALGT, GALNACT, GalNAc-T, SPG26 |
Location: |
Chr.12:57623409-57633239 on Build GRCh38 |
Assay Gene Location: | Within Exon 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT1 | NM_001276468.1 | 10 | 1692 | NP_001263397.1 |
NM_001478.4 | 11 | 2184 | NP_001469.1 | |
XM_005268773.4 | 11 | 2177 | XP_005268830.1 | |
XM_011538147.2 | 12 | 2195 | XP_011536449.1 | |
XM_011538148.2 | 12 | 2162 | XP_011536450.1 | |
XM_017019140.1 | 11 | 2279 | XP_016874629.1 | |
XM_017019141.1 | 11 | 1991 | XP_016874630.1 | |
XM_017019142.1 | 11 | 1856 | XP_016874631.1 | |
AB209460.1 | 10 | 2359 | BAD92697.1 | |
AK127448.1 | 2 | 2079 | ||
AK293432.1 | 10 | 1658 | ||
M83651.1 | 11 | 1775 | AAA35516.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv482992 | Chr.12:56206217 - 57706217 on Build GRCh38 | Gain+Loss | CS IL23A OS9 NACA NDUFA4L2 APOF HBCBP MARS MIR1228 SNORD59B BAZ2A B4GALNT1 ATP5B INHBC SNORD59A SHMT2 SLC26A10 HSD17B6 NEMP1 R3HDM2 SPRYD4 MYO1A ARHGAP9 STAC3 MIR616 MIR6758 RNF41 ARHGEF25 RDH16 PIP4K2C SDR9C7 STAT6 ANKRD52 DTX3 PAN2 CNPY2 MIP DCTN2 GLI1 NABP2 SLC39A5 KIF5A GLS2 TIMELESS STAT2 SNORA105C PTGES3 PRIM1 COQ10A LOC101927583 RBMS2 LRP1-AS LRP1 NXPH4 GPR182 NAB2 TAC3 MBD6 ZBTB39 INHBE DDIT3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |