Assay Details
Target Gene Details
Entrez Gene ID: | 1108 |
Gene Name: | chromodomain helicase DNA binding protein 4 |
Gene Aliases: |
CHD-4, Mi-2b, Mi2-BETA |
Location: |
Chr.12:6570082-6607439 on Build GRCh38 |
Assay Gene Location: | Within Exon 32 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CHD4 | NM_001273.3 | 33 | 5071 | NP_001264.2 |
NM_001297553.1 | 32 | 4916 | NP_001284482.1 | |
XM_005253668.3 | 33 | 5002 | XP_005253725.1 | |
XM_006718958.1 | 32 | 5161 | XP_006719021.1 | |
XM_006718959.1 | 33 | 5077 | XP_006719022.1 | |
XM_006718960.1 | 33 | 5074 | XP_006719023.1 | |
XM_006718961.2 | 33 | 5002 | XP_006719024.1 | |
XM_006718962.1 | 33 | 5038 | XP_006719025.1 | |
XM_017018725.1 | 33 | 5077 | XP_016874214.1 | |
XM_017018726.1 | 33 | 5077 | XP_016874215.1 | |
XM_017018727.1 | 33 | 5074 | XP_016874216.1 | |
XM_017018728.1 | 33 | 5074 | XP_016874217.1 | |
XM_017018729.1 | 33 | 5002 | XP_016874218.1 | |
XM_017018730.1 | 33 | 5038 | XP_016874219.1 | |
XM_017018731.1 | 33 | 5038 | XP_016874220.1 | |
XM_017018732.1 | 33 | 4963 | XP_016874221.1 | |
XM_017018733.1 | 33 | 4963 | XP_016874222.1 | |
XM_017018734.1 | 33 | 4963 | XP_016874223.1 | |
AK128741.1 | 32 | 4961 | ||
BC038596.1 | 32 | 5096 | AAH38596.1 | |
CR936680.1 | 32 | 4824 | ||
X86691.1 | 32 | 4948 | CAA60384.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509452 | Chr.12:6566935 - 6653627 on Build GRCh38 | Insertion | SCARNA11 NOP2 ING4 ACRBP LPAR5 CHD4 |
nsv826210 | Chr.12:6561863 - 6612310 on Build GRCh38 | Gain | SCARNA11 NOP2 CHD4 |
nsv973982 | Chr.12:6578894 - 6587817 on Build GRCh38 | Duplication | SCARNA11 CHD4 |
nsv832322 | Chr.12:6575884 - 6765914 on Build GRCh38 | Loss | ZNF384 SCARNA11 ING4 ACRBP LPAR5 MLF2 PIANP CHD4 COPS7A |
nsv826211 | Chr.12:6578422 - 6592697 on Build GRCh38 | Gain | SCARNA11 CHD4 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |