Assay Details
Target Gene Details
Entrez Gene ID: | 4849 |
Gene Name: | CCR4-NOT transcription complex subunit 3 |
Gene Aliases: |
LENG2, NOT3, NOT3H |
Location: |
Chr.19:54137689-54155708 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 13 - Intron 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNOT3 | NM_014516.3 | NP_055331.1 | ||
XM_005278279.1 | XP_005278336.1 | |||
XM_005278280.2 | XP_005278337.1 | |||
XM_005278281.1 | XP_005278338.1 | |||
XM_005278282.2 | XP_005278339.1 | |||
XM_011526992.1 | XP_011525294.1 | |||
XM_011526993.2 | XP_011525295.1 | |||
AB014591.1 | ||||
AF180474.1 | AAF29828.1 | |||
AK160386.1 | BAD18729.1 | |||
AK300434.1 | ||||
AL133647.1 | CAB63766.1 | |||
BC016474.1 | AAH16474.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3644782 | Chr.19:54138064 - 54154026 on Build GRCh38 | Gain | CNOT3 |
nsv515623 | Chr.19:54102901 - 54179150 on Build GRCh38 | Loss | PRPF31 CNOT3 MBOAT7 NDUFA3 TMC4 LENG1 TFPT |
nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion | TSEN34 PRPF31 CNOT3 OSCAR MBOAT7 NDUFA3 TMC4 LENG1 TFPT |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | MIR521-2 MIR518B MIR519D BIRC8 DPRX LILRA5 MIR516A1 MIR519A1 MIR526B MIR517B MIR518E MIR519C PRPF31 MIR516B1 MIR4752 MIR522 CNOT3 MIR371B MYADM TARM1 MBOAT7 LILRA6 MIR524 MIR1323 PRKCG MIR520F ZNF331 VN1R4 MIR515-1 MIR373 OSCAR MIR520H ZNF677 MIR526A2 MIR517C CACNG6 MIR520C CACNG8 MIR515-2 MIR512-2 MIR512-1 MIR516B2 MIR371A MIR526A1 MIR520E VSTM1 MIR527 TMC4 CACNG7 ZNF813 FAM90A27P TPM3P9 ZNF665 LILRB5 TSEN34 MIR935 MIR520G ZNF845 MIR520D ZNF765 MIR523 MIR372 LILRB3 MIR518A1 RPS9 MIR517A TFPT LILRB2 MIR498 MIR1283-2 MIR519A2 MIR518D MIR520B MIR519E ZNF818P LENG1 MIR520A ZNF761 MIR518C MIR1283-1 NDUFA3 MIR525 LOC105372457 NLRP12 MIR521-1 MIR516A2 ZNF525 LOC284379 VN1R2 MIR518A2 MIR518F MIR519B |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |