Assay Details
Target Gene Details
Entrez Gene ID: | 2583 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 1 |
Gene Aliases: |
GALGT, GALNACT, GalNAc-T, SPG26 |
Location: |
Chr.12:57623409-57633239 on Build GRCh38 |
Assay Gene Location: | Within Exon 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT1 | NM_001276468.1 | 10 | 2270 | NP_001263397.1 |
NM_001478.4 | 11 | 2762 | NP_001469.1 | |
XM_005268773.4 | 11 | 2755 | XP_005268830.1 | |
XM_011538147.2 | 12 | 2773 | XP_011536449.1 | |
XM_011538148.2 | 12 | 2740 | XP_011536450.1 | |
XM_017019140.1 | 11 | 2857 | XP_016874629.1 | |
XM_017019141.1 | 11 | 2569 | XP_016874630.1 | |
XM_017019142.1 | 11 | 2434 | XP_016874631.1 | |
AB209460.1 | 10 | 2937 | BAD92697.1 | |
M83651.1 | 11 | 2353 | AAA35516.1 |
Target Gene Details
Entrez Gene ID: | 65012 |
Gene Name: | solute carrier family 26 member 10 |
Gene Aliases: |
- |
Location: |
Chr.12:57619910-57626151 on Build GRCh38 |
Assay Gene Location: | Within Exon 14 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC26A10 | NM_133489.2 | 14 | 2311 | NP_597996.2 |
AF331523.1 | 14 | 2311 | AAM92901.1 | |
AK122981.1 | 16 | 1722 | BAC85515.1 | |
AL050358.1 | 9 | 2891 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv482992 | Chr.12:56206217 - 57706217 on Build GRCh38 | Gain+Loss | HBCBP NAB2 R3HDM2 MARS STAC3 NACA MBD6 ANKRD52 RDH16 MIP ZBTB39 LRP1 GLI1 TIMELESS CS SLC26A10 DTX3 RBMS2 LRP1-AS PTGES3 STAT2 COQ10A B4GALNT1 DDIT3 IL23A TAC3 ARHGEF25 SPRYD4 GLS2 ATP5B MIR6758 SLC39A5 HSD17B6 STAT6 NEMP1 MYO1A SDR9C7 BAZ2A OS9 CNPY2 PAN2 INHBE SNORA105C SNORD59A LOC101927583 RNF41 DCTN2 INHBC MIR1228 GPR182 APOF SNORD59B PIP4K2C KIF5A MIR616 SHMT2 NABP2 NDUFA4L2 NXPH4 ARHGAP9 PRIM1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |