Assay Details
Target Gene Details
Entrez Gene ID: | 10587 |
Gene Name: | thioredoxin reductase 2 |
Gene Aliases: |
SELZ, TR, TR-BETA, TR3, TRXR2 |
Location: |
Chr.22:19875518-19941992 on Build GRCh38 |
Assay Gene Location: | Within Exon 18 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TXNRD2 | NM_006440.4 | 17 | 1703 | NP_006431.2 |
AB019694.1 | 17 | 1514 | BAA77601.2 | |
AB019695.1 | 17 | 1608 | BAA77602.2 | |
AB209724.1 | 17 | 1481 | BAD92961.1 | |
AF044212.1 | 17 | 1524 | AAD25167.1 | |
AF106697.1 | 17 | 1703 | AAD19597.1 | |
AF166126.1 | 12 | 1588 | AAF21431.1 | |
AF166127.1 | 17 | 1608 | AAF21432.1 | |
AF171054.1 | 17 | 1521 | AAD51324.1 | |
AF201385.1 | 17 | 1511 | AAG47635.1 | |
AK094698.1 | 5 | 1058 | ||
AK097708.1 | ||||
BC007489.2 | 16 | 1398 | AAH07489.3 | |
BC117354.1 | 17 | 1483 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | SEPT5-GP1BB GNB1L TXNRD2 SEPT5 TBX1 C22orf29 GP1BB |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | SEPT5-GP1BB GNB1L RANBP1 MIR1306 ZDHHC8 MIR4761 C22orf29 COMT LINC00896 SEPT5 LOC440792 DGCR8 MIR1286 TRMT2A LOC101927859 DGCR6L CDC45 LOC284865 MIR3618 MIR6816 UFD1L ARVCF TXNRD2 LINC00895 TANGO2 TBX1 RTN4R MIR185 CLDN5 CCDC188 GP1BB |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | SEPT5-GP1BB GNB1L RANBP1 MIR1306 ZDHHC8 MIR4761 C22orf29 COMT LINC00896 SEPT5 LOC440792 DGCR8 MIR1286 TRMT2A DGCR6L LOC284865 MIR3618 MIR6816 ARVCF TXNRD2 TANGO2 TBX1 RTN4R MIR185 CCDC188 GP1BB |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | SEPT5-GP1BB GNB1L RANBP1 MIR1306 ZDHHC8 MIR4761 C22orf29 COMT LINC00896 SEPT5 LOC440792 DGCR8 MIR1286 TRMT2A DGCR6L LOC284865 MIR3618 MIR6816 ARVCF TXNRD2 TANGO2 TBX1 RTN4R MIR185 CCDC188 GP1BB |
nsv515664 | Chr.22:19873352 - 19892114 on Build GRCh38 | Loss | TXNRD2 |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | GNB1L TXNRD2 C22orf29 |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | GNB1L TXNRD2 TBX1 C22orf29 |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | SEPT5-GP1BB GNB1L TXNRD2 SEPT5 TBX1 C22orf29 GP1BB |
nsv953025 | Chr.22:19869078 - 19937977 on Build GRCh38 | Deletion | TXNRD2 |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | GNB1L RANBP1 MIR1286 MIR1306 TRMT2A DGCR6L ZDHHC8 MIR4761 C22orf29 LOC284865 COMT MIR3618 MIR6816 LINC00896 ARVCF TXNRD2 TANGO2 LOC440792 TBX1 DGCR8 RTN4R MIR185 CCDC188 |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | SEPT5-GP1BB GNB1L DGCR14 LOC102725072 DGCR10 MIR4761 C22orf29 COMT LOC100996432 PI4KAP1 RIMBP3 LOC729461 C22orf39 CLTCL1 DGCR6 SEPT5 MRPL40 DGCR5 GSC2 DGCR11 DGCR2 CDC45 LOC100996415 FAM230A SLC25A1 LOC642643 PRODH GGT3P TMEM191B UFD1L DGCR9 USP18 TXNRD2 LINC00895 HIRA LOC100996401 TSSK2 TBX1 LINC01311 CLDN5 GP1BB |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |