Assay Details
Target Gene Details
Entrez Gene ID: | 92745 |
Gene Name: | solute carrier family 38 member 5 |
Gene Aliases: |
JM24, SN2, SNAT5, pp7194 |
Location: |
Chr.X:48458537-48470256 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 20 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC38A5 | NM_033518.3 | NP_277053.2 | ||
XM_005272694.3 | XP_005272751.2 | |||
XM_005272695.4 | XP_005272752.3 | |||
XM_005272697.2 | XP_005272754.2 | |||
XM_005272698.4 | XP_005272755.2 | |||
XM_006724569.3 | XP_006724632.1 | |||
XM_017029960.1 | XP_016885449.1 | |||
XM_017029961.1 | XP_016885450.1 | |||
AF276889.1 | AAK61856.1 | |||
AF318358.1 | AAL55865.1 | |||
AK094788.1 | ||||
AW183216.1 | ||||
BC019246.2 | AAH19246.1 | |||
BC027721.2 | AAH27721.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv528292 | Chr.X:48433286 - 49274368 on Build GRCh38 | Gain | PPP1R3F GRIPAP1 CCDC120 FTSJ1 FOXP3 LOC101927635 PRICKLE3 CCDC22 PIM2 SLC35A2 WDR13 TIMM17B PCSK1N WDR45 RBM3 TBC1D25 PLP2 PQBP1 HDAC6 CACNA1F SLC38A5 EBP SYP-AS1 TFE3 SYP GLOD5 MAGIX KCND1 WAS GPKOW OTUD5 GATA1 ERAS PORCN PRAF2 SUV39H1 |
esv32909 | Chr.X:48003374 - 49285646 on Build GRCh38 | Gain+Loss | ZNF630-AS1 SPACA5B PPP1R3F SSX4B GRIPAP1 CCDC120 FTSJ1 FOXP3 SSX3 LOC101927635 PRICKLE3 CCDC22 SSX6 PIM2 SPACA5 SLC35A2 ZNF182 WDR13 TIMM17B PCSK1N WDR45 SSX4 RBM3 TBC1D25 PLP2 PQBP1 HDAC6 CACNA1F SLC38A5 ZNF630 EBP SYP-AS1 TFE3 SYP GLOD5 MAGIX KCND1 WAS GPKOW SSX9 SSX1 OTUD5 GATA1 SSX5 ERAS PORCN PRAF2 SUV39H1 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |