Assay Details
Target Gene Details
Entrez Gene ID: | 79680 |
Gene Name: | chromosome 22 open reading frame 29 |
Gene Aliases: |
BOP |
Location: |
Chr.22:19846138-19854848 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C22orf29 | NM_024627.5 | 3 | 1048 | NP_078903.3 |
AK024778.1 | 1 | 424 | BAB14998.1 | |
AK225088.1 | 1 | 424 | ||
AK291262.1 | 3 | 1016 | ||
AL832509.1 | 3 | 937 | ||
BC011679.2 | 1 | 555 | AAH11679.2 | |
BX640785.1 | 2 | 1137 | CAE45875.1 | |
BX640969.1 | 3 | 1017 | CAE45984.1 | |
BX640998.1 | 3 | 1017 | CAE46001.1 |
Target Gene Details
Entrez Gene ID: | 54584 |
Gene Name: | G protein subunit beta 1 like |
Gene Aliases: |
DGCRK3, FKSG1, GY2, WDR14, WDVCF |
Location: |
Chr.22:19788411-19854939 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GNB1L | NM_053004.2 | NP_443730.1 | ||
AB051432.1 | ||||
AF238328.1 | AAG36826.1 | |||
AF301895.1 | AAG53933.1 | |||
AY007378.1 | AAG12162.1 | |||
BC012060.1 | AAH12060.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | SEPT5 TBX1 TXNRD2 SEPT5-GP1BB GP1BB GNB1L C22orf29 |
nsv953024 | Chr.22:19842078 - 19854877 on Build GRCh38 | Deletion | GNB1L C22orf29 |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | MIR6816 MIR1286 DGCR8 LOC440792 ZDHHC8 MIR185 CCDC188 TXNRD2 RANBP1 LINC00895 CLDN5 C22orf29 ARVCF LOC101927859 MIR3618 TBX1 DGCR6L MIR1306 SEPT5-GP1BB MIR4761 LINC00896 TANGO2 SEPT5 COMT TRMT2A GP1BB GNB1L CDC45 LOC284865 UFD1L RTN4R |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | MIR6816 MIR1286 DGCR8 LOC440792 ZDHHC8 MIR185 CCDC188 TXNRD2 RANBP1 C22orf29 ARVCF MIR3618 TBX1 DGCR6L MIR1306 SEPT5-GP1BB MIR4761 LINC00896 TANGO2 SEPT5 COMT TRMT2A GP1BB GNB1L LOC284865 RTN4R |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | MIR6816 MIR1286 DGCR8 LOC440792 ZDHHC8 MIR185 CCDC188 TXNRD2 RANBP1 C22orf29 ARVCF MIR3618 TBX1 DGCR6L MIR1306 SEPT5-GP1BB MIR4761 LINC00896 TANGO2 SEPT5 COMT TRMT2A GP1BB GNB1L LOC284865 RTN4R |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | TXNRD2 GNB1L C22orf29 |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | TBX1 TXNRD2 GNB1L C22orf29 |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | SEPT5 TBX1 TXNRD2 SEPT5-GP1BB GP1BB GNB1L C22orf29 |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | MIR3618 MIR6816 TBX1 MIR1286 DGCR6L MIR1306 DGCR8 LOC440792 MIR4761 LINC00896 TANGO2 ZDHHC8 MIR185 CCDC188 COMT TXNRD2 TRMT2A RANBP1 GNB1L C22orf29 LOC284865 RTN4R ARVCF |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | LOC642643 SLC25A1 GSC2 MRPL40 HIRA DGCR11 DGCR14 DGCR9 DGCR6 GGT3P TXNRD2 PI4KAP1 LOC102725072 TMEM191B LINC00895 LOC100996415 CLDN5 C22orf29 C22orf39 PRODH TBX1 LOC729461 CLTCL1 DGCR10 SEPT5-GP1BB USP18 MIR4761 LINC01311 DGCR2 SEPT5 COMT LOC100996432 FAM230A LOC100996401 DGCR5 GP1BB GNB1L CDC45 UFD1L RIMBP3 TSSK2 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |