Assay Details
Target Gene Details
Entrez Gene ID: | 283232 |
Gene Name: | transmembrane protein 80 |
Gene Aliases: |
- |
Location: |
Chr.11:695386-705028 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TMEM80 | NM_001042463.2 | 5 | 831 | NP_001035928.2 |
NM_001276253.1 | NP_001263182.1 | |||
NM_001276274.1 | NP_001263203.1 | |||
NM_174940.3 | 5 | 807 | NP_777600.3 | |
XM_006718206.3 | XP_006718269.3 | |||
XM_017017600.1 | XP_016873089.1 | |||
AI739035.1 | ||||
AK124309.1 | ||||
AK302585.1 | ||||
BC008671.1 | 5 | 755 | ||
BM874316.1 | ||||
CK819789.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv522733 | Chr.11:702250 - 752059 on Build GRCh38 | Loss | TALDO1 EPS8L2 TMEM80 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | RPLP2 SNORA52 MIR210HG HRAS TALDO1 CD151 PHRF1 RNH1 LOC101059906 LOC143666 MIR210 PIDD1 MUC5AC B4GALNT4 DRD4 MUC5B ANO9 PANO1 MUC6 DEAF1 POLR2L LOC101927503 PTDSS2 CHID1 SLC25A22 CRACR2B RASSF7 SIGIRR IRF7 CEND1 CDHR5 SCT MUC2 MIR6744 PKP3 TSPAN4 EPS8L2 PNPLA2 LRRC56 LOC171391 AP2A2 PDDC1 LMNTD2 TOLLIP TMEM80 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | DRD4 DEAF1 TALDO1 EPS8L2 TMEM80 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | RPLP2 SNORA52 MIR210HG HRAS TALDO1 CD151 PHRF1 RNH1 LOC101059906 LOC143666 MIR210 PIDD1 MUC5AC DRD4 MUC5B ANO9 PANO1 MUC6 TOLLIP-AS1 DEAF1 POLR2L LOC101927503 PTDSS2 CHID1 SLC25A22 CRACR2B RASSF7 SIGIRR IRF7 CEND1 CDHR5 SCT MUC2 MIR6744 TSPAN4 EPS8L2 PNPLA2 LRRC56 LOC171391 AP2A2 PDDC1 LMNTD2 TOLLIP TMEM80 |
nsv552869 | Chr.11:702097 - 727446 on Build GRCh38 | Loss | EPS8L2 TMEM80 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | RPLP2 SNORA52 MIR210HG HRAS TALDO1 CD151 PHRF1 RNH1 LOC101059906 LOC143666 MIR210 PIDD1 B4GALNT4 DRD4 ANO9 PANO1 DEAF1 POLR2L PTDSS2 CHID1 SLC25A22 CRACR2B RASSF7 SIGIRR IRF7 CEND1 CDHR5 SCT PKP3 TSPAN4 EPS8L2 PNPLA2 LRRC56 LOC171391 AP2A2 PDDC1 LMNTD2 TMEM80 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | RPLP2 SNORA52 MIR210HG HRAS TALDO1 CD151 PHRF1 RNH1 LOC101059906 LOC143666 MIR210 PIDD1 DRD4 PANO1 DEAF1 POLR2L PTDSS2 CHID1 SLC25A22 CRACR2B RASSF7 IRF7 CEND1 CDHR5 SCT TSPAN4 EPS8L2 PNPLA2 LRRC56 LOC171391 PDDC1 LMNTD2 TMEM80 |