Assay Details
Target Gene Details
Entrez Gene ID: | 4849 |
Gene Name: | CCR4-NOT transcription complex subunit 3 |
Gene Aliases: |
LENG2, NOT3, NOT3H |
Location: |
Chr.19:54137689-54155708 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 7 - Intron 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNOT3 | NM_014516.3 | NP_055331.1 | ||
XM_005278279.1 | XP_005278336.1 | |||
XM_005278280.2 | XP_005278337.1 | |||
XM_005278281.1 | XP_005278338.1 | |||
XM_005278282.2 | XP_005278339.1 | |||
XM_011526992.1 | XP_011525294.1 | |||
XM_011526993.2 | XP_011525295.1 | |||
AB014591.1 | ||||
AF180474.1 | AAF29828.1 | |||
AK160386.1 | BAD18729.1 | |||
AK300434.1 | ||||
AL133647.1 | CAB63766.1 | |||
BC016474.1 | AAH16474.1 | |||
BQ439042.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3644782 | Chr.19:54138064 - 54154026 on Build GRCh38 | Gain | CNOT3 |
nsv515623 | Chr.19:54102901 - 54179150 on Build GRCh38 | Loss | CNOT3 TMC4 LENG1 PRPF31 MBOAT7 TFPT NDUFA3 |
nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion | OSCAR CNOT3 TMC4 LENG1 PRPF31 MBOAT7 TSEN34 TFPT NDUFA3 |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | MIR1283-1 OSCAR MIR518A2 ZNF813 ZNF818P TMC4 LILRB3 LENG1 FAM90A27P MIR373 NLRP12 MIR498 MIR518F NDUFA3 TPM3P9 CACNG6 PRPF31 MIR371B LOC105372457 MIR1283-2 MIR526B ZNF677 MIR518D MIR520D DPRX MIR519A2 MIR1323 RPS9 MIR526A2 MIR935 MIR520C MIR520H MIR521-2 MIR517C MIR516A1 MYADM MIR518A1 MIR525 MIR519E MIR516B1 MIR516B2 ZNF761 VSTM1 MIR523 TARM1 CACNG8 MIR517B MIR518B LILRA5 LOC284379 BIRC8 MIR520B MIR519C MIR371A CACNG7 ZNF845 MIR518C MIR518E MIR512-1 MIR372 MIR526A1 MIR520A PRKCG TFPT MIR520E LILRA6 MIR520F MIR515-2 CNOT3 MIR519D MIR519A1 LILRB5 MIR516A2 MIR524 MIR520G MIR515-1 TSEN34 VN1R4 ZNF765 ZNF665 MIR521-1 MIR512-2 ZNF331 LILRB2 MIR522 MIR527 ZNF525 MBOAT7 VN1R2 MIR4752 MIR517A MIR519B |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |