Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 13 - Intron 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | NP_848632.2 | ||
XM_017017654.1 | XP_016873143.1 | |||
AB089939.1 | BAD06471.1 | |||
BC131528.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | MIR210 SIGIRR IRF7 RNH1 B4GALNT4 PGGHG PHRF1 PTDSS2 IFITM3 LOC101059906 LRRC56 IFITM1 MIR210HG CDHR5 PKP3 ANO9 LMNTD2 LOC143666 RASSF7 HRAS IFITM5 IFITM2 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | SIGIRR PKP3 ANO9 B4GALNT4 |
nsv1118197 | Chr.11:374500 - 377100 on Build GRCh38 | Deletion | B4GALNT4 |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | PKP3 B4GALNT4 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | SIGIRR PKP3 ANO9 RNH1 B4GALNT4 PTDSS2 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | SIGIRR PKP3 ANO9 B4GALNT4 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | PSMD13 SIGIRR SIRT3 B4GALNT4 PGGHG PTDSS2 IFITM3 IFITM1 PKP3 ANO9 MIR6743 BET1L RIC8A ODF3 IFITM5 NLRP6 IFITM2 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | SIGIRR PKP3 ANO9 B4GALNT4 PTDSS2 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | MIR210 SIGIRR PIDD1 IRF7 LOC171391 B4GALNT4 TSPAN4 PHRF1 PTDSS2 SCT MIR210HG CDHR5 EPS8L2 PDDC1 PKP3 ANO9 CEND1 PNPLA2 RPLP2 LOC143666 HRAS SNORA52 SLC25A22 DRD4 CHID1 TALDO1 CRACR2B RNH1 TMEM80 DEAF1 LOC101059906 LRRC56 AP2A2 LMNTD2 PANO1 RASSF7 POLR2L CD151 |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |