Assay Details
Target Gene Details
Entrez Gene ID: | 79587 |
Gene Name: | cysteinyl-tRNA synthetase 2, mitochondrial (putative) |
Gene Aliases: |
COXPD27, cysRS |
Location: |
Chr.13:110641410-110713527 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 18 - Exon 19 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CARS2 | NM_024537.3 | NP_078813.1 | ||
XM_006719953.2 | XP_006720016.1 | |||
XM_011521116.1 | XP_011519418.1 | |||
XM_017020741.1 | XP_016876230.1 | |||
AB062436.1 | BAB93499.1 | |||
AK022180.1 | BAB13978.1 | |||
AK091992.1 | ||||
AK092947.1 | ||||
AK124505.1 | 1 | 3129 | ||
BC007220.1 | AAH07220.1 | |||
BE464542.1 | ||||
BX648882.1 | CAH10378.1 | |||
BX649191.1 | 5 | 2389 | CAE46210.1 | |
CB047094.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv563125 | Chr.13:110627655 - 110657270 on Build GRCh38 | Loss | CARS2 NAXD |
nsv1044234 | Chr.13:110490706 - 110718233 on Build GRCh38 | Gain | COL4A2-AS1 RAB20 CARS2 NAXD ING1 COL4A2 LOC105376684 |
nsv563124 | Chr.13:110608920 - 110648596 on Build GRCh38 | Loss | CARS2 NAXD |
nsv832720 | Chr.13:110447888 - 110643646 on Build GRCh38 | Loss | COL4A2-AS1 RAB20 CARS2 NAXD COL4A2 COL4A2-AS2 |
nsv1042232 | Chr.13:110629776 - 110696128 on Build GRCh38 | Gain | CARS2 NAXD |
nsv1044340 | Chr.13:110581726 - 111040647 on Build GRCh38 | Gain | LOC105370362 LINC00567 LINC00431 CARS2 LINC00346 ANKRD10 NAXD LOC105370363 ING1 LOC105376684 |
More Information
Additional Information:
For this assay, SNP(s) [rs549395705] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Non-exonic DGV Variation |