Genomic Map
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Target Gene Details
Entrez Gene ID: | 81631 |
Gene Name: | microtubule associated protein 1 light chain 3 beta |
Gene Aliases: |
ATG8F, LC3B, MAP1A/1BLC3, MAP1LC3B-a |
Location: |
Chr.16:87392195-87404774 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| MAP1LC3B | NM_022818.4 | 4 | 1145 | NP_073729.1 |
| AF087871.1 | 4 | 1004 | AAM10499.1 | |
| AF183417.1 | 4 | 1004 | AAG09686.1 | |
| AF303888.1 | 4 | 950 | AAG23182.1 | |
| AK024571.1 | 1 | 282 | ||
| AK025556.1 | 4 | 996 | BAB15169.1 | |
| AK290956.1 | 4 | 1027 | ||
| AK310224.1 | 5 | 1112 | ||
| AK310335.1 | 4 | 785 | ||
| AL834298.1 | 4 | 914 | CAD38970.1 | |
| BC018634.2 | 4 | 983 | AAH18634.1 | |
| BC041874.1 | 4 | 1540 | AAH41874.1 | |
| BC045759.1 | 5 | 1486 | AAH45759.1 | |
| BC067797.1 | 4 | 996 | AAH67797.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| dgv499n67 | Chr.16:87353978 - 87409229 on Build GRCh38 | Gain |
 FBXO31
ZCCHC14
MAP1LC3B
|
| nsv978173 | Chr.16:87403122 - 87403717 on Build GRCh38 | Duplication |
MAP1LC3B
|
| nsv833320 | Chr.16:87315844 - 87501226 on Build GRCh38 | Gain |
C16orf95
FBXO31
ZCCHC14
LOC101928659
LOC101928737
MAP1LC3B
|
| nsv428330 | Chr.16:87336922 - 87633082 on Build GRCh38 | Gain |
FBXO31
ZCCHC14
LOC101928737
MAP1LC3B
JPH3
|
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Additional Information:
For this assay, SNP(s) [rs76788332] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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