Assay Details
Target Gene Details
Entrez Gene ID: | 3299 |
Gene Name: | heat shock transcription factor 4 |
Gene Aliases: |
CTM, CTRCT5 |
Location: |
Chr.16:67163385-67169945 on Build GRCh38 |
Assay Gene Location: | Within Exon 15 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HSF4 | NM_001040667.2 | 15 | 2408 | NP_001035757.1 |
NM_001538.3 | 15 | 2318 | NP_001529.2 | |
AB029348.1 | 13 | 1450 | BAA84582.1 | |
AK225152.1 | 11 | 1166 | ||
BG980713.1 | 1 | 123 | ||
BI001524.1 | ||||
BM768246.1 | 4 | 270 | ||
CA412687.1 | 1 | 215 | ||
D87673.1 | 13 | 1360 | BAA13433.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv522852 | Chr.16:67153308 - 68071571 on Build GRCh38 | Gain | FHOD1 AGRP KIAA0895L ENKD1 CTRL LOC105369155 TPPP3 PLEKHG4 LOC107984813 ATP6V0D1 PARD6A FBXL8 THAP11 ELMO3 LOC100131303 DDX28 PSMB10 DPEP3 EDC4 LRRC36 LRRC29 E2F4 SLC12A4 C16orf86 TSNAXIP1 CENPT NOL3 TRADD HSF4 KCTD19 GFOD2 HSD11B2 SLC9A5 EXOC3L1 CTCF TMEM208 PSKH1 LOC100505942 MIR328 DPEP2 FAM65A ZDHHC1 CARMIL2 NRN1L ACD DUS2 NUTF2 RANBP10 LCAT |
nsv827707 | Chr.16:67148355 - 67289296 on Build GRCh38 | Loss | MIR328 ELMO3 B3GNT9 FHOD1 NOL3 KIAA0895L C16orf70 LOC105369155 TRADD HSF4 PLEKHG4 SLC9A5 LRRC29 E2F4 EXOC3L1 FBXL8 TMEM208 |
nsv952044 | Chr.16:67141198 - 67244397 on Build GRCh38 | Deletion | MIR328 ELMO3 B3GNT9 FHOD1 NOL3 KIAA0895L C16orf70 LOC105369155 TRADD HSF4 LRRC29 E2F4 EXOC3L1 FBXL8 TMEM208 |
nsv1160429 | Chr.16:67161549 - 67220197 on Build GRCh38 | Deletion | MIR328 ELMO3 LRRC29 NOL3 KIAA0895L E2F4 EXOC3L1 LOC105369155 HSF4 FBXL8 |
nsv524363 | Chr.16:67136529 - 68071571 on Build GRCh38 | Loss | FHOD1 AGRP KIAA0895L ENKD1 CTRL LOC105369155 TPPP3 PLEKHG4 LOC107984813 ATP6V0D1 PARD6A FBXL8 THAP11 ELMO3 B3GNT9 LOC100131303 DDX28 PSMB10 DPEP3 EDC4 LRRC36 LRRC29 E2F4 SLC12A4 C16orf86 TSNAXIP1 CENPT NOL3 TRADD HSF4 KCTD19 GFOD2 HSD11B2 SLC9A5 EXOC3L1 CTCF TMEM208 PSKH1 LOC100505942 MIR328 DPEP2 C16orf70 FAM65A ZDHHC1 CARMIL2 NRN1L ACD DUS2 NUTF2 RANBP10 LCAT |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |