Assay Details
Target Gene Details
Entrez Gene ID: | 2217 |
Gene Name: | Fc fragment of IgG receptor and transporter |
Gene Aliases: |
FCRN, alpha-chain |
Location: |
Chr.19:49512279-49526428 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FCGRT | NM_001136019.2 | 5 | 1262 | NP_001129491.1 |
NM_004107.4 | 4 | 998 | NP_004098.1 | |
XM_005258657.1 | 4 | 817 | XP_005258714.1 | |
XM_011526627.2 | 3 | 679 | XP_011524929.1 | |
AK074734.1 | 2 | 1466 | ||
AK075510.1 | 5 | 646 | ||
AK075532.1 | 5 | 912 | ||
AK299124.1 | 5 | 868 | ||
BC008734.2 | 4 | 942 | AAH08734.1 | |
BE245284.1 | ||||
BT006828.1 | 4 | 776 | AAP35474.1 | |
BX647163.1 | 5 | 882 | CAI46032.1 | |
U12255.1 | 4 | 901 | AAA58958.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | ATF5 LHB LOC101059948 SNAR-D SNAR-A8 FGF21 CCDC114 SYNGR4 IL4I1 MAMSTR MED25 C19orf68 SNAR-B2 SPACA4 SULT2B1 CGB7 ZNF114 SNORD34 RASIP1 RPL18 SCAF1 MIR150 CGB3 TSKS GFY SEC1P SNAR-C5 SNAR-C2 CCDC155 CYTH2 MIR4749 SNAR-A4 CPT1C FAM83E PLA2G4C-AS1 NOSIP SNAR-C1 SNAR-A11 KDELR1 HSD17B14 FLT3LG EMP3 MIR4324 BCL2L12 SNAR-A1 PNKP RRAS CABP5 SNORD32A RPS11 MIR6800 AKT1S1 SNAR-A3 PRR12 SNORD33 CGB8 SPHK2 PPP1R15A LOC101928295 SNAR-A10 PLEKHA4 ADM5 SLC17A7 LIN7B CGB1 SNAR-G2 C19orf73 TULP2 NTF4 SNAR-B1 SNAR-A5 ZNF473 SIGLEC11 RCN3 SIGLEC16 CD37 LMTK3 SNORD35B HRC MIR6798 PTH2 SNAR-A9 FUT1 LOC105447645 ELSPBP1 SNAR-A12 NUCB1 PIH1D1 DKKL1 CARD8 SNAR-C3 TMEM143 FUT2 SNAR-G1 VRK3 KCNA7 CGB5 IZUMO1 GYS1 GRWD1 GRIN2D FCGRT MIR6799 SNAR-A6 DHDH RPL13A DBP FUZ IRF3 SNORD35A PPFIA3 KCNJ14 MIR4751 LOC100287477 SNAR-A7 CGB2 AP2A1 PTOV1-AS1 FTL FLJ26850 BAX SNAR-A2 PTOV1-AS2 NUP62 PLA2G4C NTN5 TEAD2 LIG1 SNRNP70 SNAR-C4 SLC6A16 PRMT1 CARD8-AS1 BCAT2 NUCB1-AS1 SNAR-A14 LOC105372430 RUVBL2 BSPH1 PRRG2 MIR4750 TBC1D17 TRPM4 SNAR-A13 MIR5088 ALDH16A1 PTOV1 CA11 |
nsv833863 | Chr.19:49479177 - 49629716 on Build GRCh38 | Loss | PRRG2 SNORD32A RPS11 RCN3 FCGRT SNORD35B PRR12 NOSIP SNORD33 RPL13A SNORD34 SNORD35A MIR150 FLT3LG |
nsv833862 | Chr.19:49448789 - 49570676 on Build GRCh38 | Loss | SNORD32A RPS11 RCN3 FCGRT SNORD35B NOSIP SNORD33 ALDH16A1 RPL13A SNORD34 SNORD35A MIR150 FLT3LG PIH1D1 |
nsv1160655 | Chr.19:49489110 - 49841830 on Build GRCh38 | Deletion | AP2A1 PTOV1-AS1 RCN3 CPT1C SNORD35B NOSIP PRMT1 BCL2L12 PRRG2 MED25 RRAS SNORD32A RPS11 MIR6800 FCGRT MIR6799 PRR12 SNORD33 MIR5088 RPL13A ADM5 SNORD34 FUZ IRF3 SCAF1 SNORD35A MIR150 TSKS |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |