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System Message

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See other TFPT CNV Assays ›
Gene Symbol
TFPT
Assay Reference Genome
Location

Chr.19:54115265 on build GRCh38
Cytoband
19q13.42
Assay ID Hs01987414_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Online offer:
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Assay Details

Target Gene Details

Entrez Gene ID:

 29844

Gene Name:

 TCF3 fusion partner

Gene Aliases:

 FB1, INO80F, amida

Location:

 Chr.19:54107013-54115675 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TFPT NM_013342.3 NP_037474.1
AF052052.1 AAD45182.1
AK310627.1
AK310647.1
BC004281.1 AAH04281.1
BC007776.2 AAH07776.1
BI820344.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion TARM1 PRPF31 NDUFA3 OSCAR VSTM1 TFPT
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss PRPF31 NDUFA3 TMC4 CNOT3 LENG1 MBOAT7 TFPT
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion PRPF31 NDUFA3 TMC4 CNOT3 TSEN34 OSCAR LENG1 MBOAT7 TFPT
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion CACNG6 MIR520E ZNF677 MIR522 LILRB5 CNOT3 MIR4752 MIR517B MIR526A2 MIR518D MIR521-1 ZNF665 MIR518A1 ZNF761 ZNF765 LILRB3 MIR371A MIR519B MIR498 ZNF813 MYADM MIR519D MIR517C MIR515-1 MIR520F TARM1 MIR527 MIR519C MIR371B MIR520D MIR935 OSCAR MIR518B ZNF525 TPM3P9 MIR518C MIR518A2 ZNF818P CACNG8 MIR520A ZNF845 LILRA5 MIR373 TMC4 MIR524 LILRA6 MIR520B MIR523 MIR519E MIR526A1 NDUFA3 MIR372 LOC105372457 MIR526B BIRC8 TSEN34 FAM90A27P MIR520G NLRP12 MIR525 MIR1283-2 ZNF331 MIR521-2 MIR520C MIR518E CACNG7 PRKCG MIR520H LOC284379 PRPF31 MIR1323 MIR519A2 MIR512-1 VN1R4 MIR519A1 VSTM1 MIR515-2 TFPT MIR516B2 MIR518F MIR516A2 MIR1283-1 LILRB2 MIR516A1 MIR516B1 LENG1 VN1R2 MIR517A MIR512-2 DPRX MBOAT7 RPS9
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss TARM1 PRPF31 NDUFA3 OSCAR TFPT
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss TARM1 CACNG6 PRPF31 NDUFA3 MIR935 OSCAR VSTM1 TFPT CACNG8

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