Assay Details
Target Gene Details
Entrez Gene ID: | 79948 |
Gene Name: | phospholipid phosphatase related 3 |
Gene Aliases: |
LPPR3, LPR3, PRG-2, PRG2 |
Location: |
Chr.19:812488-824244 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PLPPR3 | NM_001270366.1 | 3 | 241 | NP_001257295.1 |
NM_024888.2 | 3 | 241 | NP_079164.1 | |
XM_011528317.2 | 3 | 833 | XP_011526619.1 | |
AF357888.1 | 2 | 585 | AAO85401.1 | |
AF541282.1 | 3 | 241 | AAP57771.1 | |
AL136596.1 | 3 | 241 | CAB66531.1 | |
AY304517.1 | 3 | 241 | AAP72154.1 | |
AY436785.1 | 3 | 240 | AAR10818.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2743119 | Chr.19:815363 - 815727 on Build GRCh38 | Deletion | PLPPR3 |
dgv134n111 | Chr.19:607984 - 967584 on Build GRCh38 | Deletion | HCN2 CFD MIR4745 KISS1R PTBP1 ELANE MISP PRSS57 MIR3187 FSTL3 POLRMT RNU6-9 LOC101928450 FGF22 MED16 PALM R3HDM4 PLPPR3 PRTN3 AZU1 RNF126 ARID3A |
nsv578172 | Chr.19:811414 - 841398 on Build GRCh38 | Loss | PTBP1 PLPPR3 PRTN3 MIR3187 AZU1 |
nsv578167 | Chr.19:797079 - 850574 on Build GRCh38 | Loss | MIR4745 PTBP1 PLPPR3 PRTN3 MIR3187 AZU1 |
nsv953938 | Chr.19:355801 - 1104501 on Build GRCh38 | Deletion | GRIN3B TPGS1 MIR4745 KISS1R ELANE PRSS57 ABCA7 C2CD4C LOC101928450 FGF22 GPX4 MED16 R3HDM4 PLPPR3 SHC2 GZMM BSG ODF3L2 HCN2 ARHGAP45 CFD PTBP1 THEG MISP MIR3187 FSTL3 MADCAM1 POLRMT TMEM259 LOC105372235 CNN2 RNU6-9 PALM WDR18 PRTN3 AZU1 CDC34 RNF126 ARID3A RNU6-2 POLR2E |
nsv470101 | Chr.19:401714 - 1008505 on Build GRCh38 | Loss | GRIN3B TPGS1 MIR4745 KISS1R ELANE PRSS57 C2CD4C LOC101928450 FGF22 MED16 R3HDM4 PLPPR3 SHC2 GZMM BSG ODF3L2 HCN2 CFD PTBP1 MISP MIR3187 FSTL3 MADCAM1 POLRMT LOC105372235 RNU6-9 PALM WDR18 PRTN3 AZU1 CDC34 RNF126 ARID3A |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |