Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56111 |
Gene Name: | protocadherin gamma subfamily A, 4 |
Gene Aliases: |
PCDH-GAMMA-A4 |
Location: |
Chr.5:141355025-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA4 | NM_018917.3 | NP_061740.2 | ||
AF152324.1 | AAD43718.1 |
Target Gene Details
Entrez Gene ID: | 56110 |
Gene Name: | protocadherin gamma subfamily A, 5 |
Gene Aliases: |
CDH-GAMMA-A5, ME3, PCDH-GAMMA-A5 |
Location: |
Chr.5:141364331-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA5 | NM_018918.2 | NP_061741.1 | ||
AF152325.1 | AAD43719.1 |
Target Gene Details
Entrez Gene ID: | 56109 |
Gene Name: | protocadherin gamma subfamily A, 6 |
Gene Aliases: |
PCDH-GAMMA-A6 |
Location: |
Chr.5:141374084-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA6 | NM_018919.2 | NP_061742.1 | ||
AB209178.1 | BAD92415.1 | |||
AF152326.1 | AAD43720.1 | |||
BC146651.1 |
Target Gene Details
Entrez Gene ID: | 56108 |
Gene Name: | protocadherin gamma subfamily A, 7 |
Gene Aliases: |
PCDH-GAMMA-A7 |
Location: |
Chr.5:141382739-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA7 | NM_018920.3 | NP_061743.1 | ||
AB208958.1 | BAD92195.1 | |||
AF152327.1 | AAD43721.1 |
Target Gene Details
Entrez Gene ID: | 9708 |
Gene Name: | protocadherin gamma subfamily A, 8 |
Gene Aliases: |
PCDH-GAMMA-A8 |
Location: |
Chr.5:141391916-141512979 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA8 | NM_014004.2 | 1 | 2354 | NP_054723.1 |
NM_032088.1 | 1 | 2354 | NP_114477.1 | |
AB002325.1 | 1 | 4113 | ||
AF152328.1 | 1 | 1456 | AAD43722.1 | |
AF152515.1 | 1 | 1456 | AAD43775.1 | |
BC152415.1 | 1 | 4113 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
AF152330.1 | AAD43724.1 |
Target Gene Details
Entrez Gene ID: | 56103 |
Gene Name: | protocadherin gamma subfamily B, 2 |
Gene Aliases: |
PCDH-GAMMA-B2 |
Location: |
Chr.5:141360136-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB2 | NM_018923.2 | NP_061746.1 | ||
AF152331.1 | AAD43725.1 |
Target Gene Details
Entrez Gene ID: | 56102 |
Gene Name: | protocadherin gamma subfamily B, 3 |
Gene Aliases: |
PCDH-GAMMA-B3 |
Location: |
Chr.5:141370264-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB3 | NM_018924.4 | NP_061747.2 | ||
AF152332.1 | AAD43726.1 | |||
BC150172.1 |
Target Gene Details
Entrez Gene ID: | 8641 |
Gene Name: | protocadherin gamma subfamily B, 4 |
Gene Aliases: |
CDH20, FIB2, PCDH-GAMMA-B4 |
Location: |
Chr.5:141387885-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB4 | NM_003736.2 | NP_003727.1 | ||
AF152333.1 | AAD43727.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHGB5 PCDHB17P PCDHGA6 PCDHGA12 PCDHB10 TAF7 PCDHB15 PCDHGA9 PCDHGB2 PCDHA10 PCDHAC1 PCDHA4 PCDHA7 PCDHGA4 PCDHB8 PCDHA8 PCDHA6 PCDHGA8 PCDHGA10 PCDHB6 PCDHB11 PCDHB1 PCDHAC2 PCDHA11 PCDHB14 PCDHGA3 LOC101926905 PCDHGB4 PCDHA2 PCDHGA11 PCDHA5 PCDHB2 PCDHA9 PCDHGB3 PCDHB18P PCDHB9 PCDHA13 SLC25A2 PCDHGB6 PCDHB13 PCDHGB7 PCDHGB8P PCDHGA7 PCDHB7 PCDHA12 PCDHB19P PCDHB16 PCDHGA1 PCDHGB1 PCDHGA5 PCDHGA2 PCDHB5 PCDHB4 PCDHB3 PCDHA3 PCDHB12 PCDHA1 |
esv3606985 | Chr.5:141389770 - 141397963 on Build GRCh38 | Gain | PCDHGA8 PCDHGA3 PCDHGB1 PCDHGA4 PCDHGA7 PCDHGA6 PCDHGB4 PCDHGA5 PCDHGB3 PCDHGA2 PCDHGB2 PCDHGA1 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGB5 PCDHGA8 PCDHGB1 PCDHGA6 PCDHGA10 PCDHGA5 PCDHGB3 PCDHGA2 PCDHGA9 PCDHGB2 PCDHGB6 PCDHGA3 PCDHGA4 PCDHGA7 PCDHGB4 PCDHGA1 |
nsv823280 | Chr.5:141388318 - 141397872 on Build GRCh38 | Loss | PCDHGA8 PCDHGA3 PCDHGB1 PCDHGA4 PCDHGA7 PCDHGA6 PCDHGB4 PCDHGA5 PCDHGB3 PCDHGA2 PCDHGB2 PCDHGA1 |
nsv519627 | Chr.5:141392860 - 141427689 on Build GRCh38 | Loss | PCDHGB5 PCDHGA8 PCDHGB1 PCDHGA6 PCDHGA10 PCDHGA5 PCDHGB3 PCDHGA2 PCDHGA9 PCDHGB2 PCDHGB6 PCDHGB7 PCDHGB8P PCDHGA3 PCDHGA4 PCDHGA7 PCDHGB4 PCDHGA1 PCDHGA11 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |