Assay Details
Target Gene Details
Entrez Gene ID: | 3299 |
Gene Name: | heat shock transcription factor 4 |
Gene Aliases: |
CTM, CTRCT5 |
Location: |
Chr.16:67163385-67169945 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 9 - Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HSF4 | NM_001040667.2 | NP_001035757.1 | ||
NM_001538.3 | NP_001529.2 | |||
AB029348.1 | BAA84582.1 | |||
AK225152.1 | ||||
AK296210.1 | ||||
D87673.1 | BAA13433.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv522852 | Chr.16:67153308 - 68071571 on Build GRCh38 | Gain | GFOD2 DDX28 PLEKHG4 FHOD1 MIR328 CTRL LOC100505942 LRRC36 CTCF LOC105369155 CENPT NRN1L C16orf86 EXOC3L1 TPPP3 KCTD19 SLC12A4 LOC100131303 TMEM208 ELMO3 NOL3 ZDHHC1 NUTF2 TRADD DPEP3 DUS2 AGRP FBXL8 DPEP2 THAP11 CARMIL2 LOC107984813 ATP6V0D1 KIAA0895L FAM65A HSD11B2 TSNAXIP1 ENKD1 PSKH1 HSF4 E2F4 SLC9A5 LCAT EDC4 RANBP10 PARD6A LRRC29 ACD PSMB10 |
nsv827707 | Chr.16:67148355 - 67289296 on Build GRCh38 | Loss | B3GNT9 EXOC3L1 C16orf70 FBXL8 PLEKHG4 FHOD1 HSF4 E2F4 MIR328 TMEM208 SLC9A5 ELMO3 NOL3 LOC105369155 LRRC29 KIAA0895L TRADD |
nsv952044 | Chr.16:67141198 - 67244397 on Build GRCh38 | Deletion | B3GNT9 EXOC3L1 C16orf70 FBXL8 FHOD1 HSF4 E2F4 MIR328 TMEM208 ELMO3 NOL3 LOC105369155 LRRC29 KIAA0895L TRADD |
nsv1160429 | Chr.16:67161549 - 67220197 on Build GRCh38 | Deletion | MIR328 ELMO3 EXOC3L1 FBXL8 NOL3 LOC105369155 LRRC29 KIAA0895L HSF4 E2F4 |
nsv524363 | Chr.16:67136529 - 68071571 on Build GRCh38 | Loss | GFOD2 DDX28 B3GNT9 PLEKHG4 FHOD1 MIR328 CTRL LOC100505942 LRRC36 CTCF LOC105369155 CENPT NRN1L C16orf86 EXOC3L1 TPPP3 KCTD19 C16orf70 SLC12A4 LOC100131303 TMEM208 ELMO3 NOL3 ZDHHC1 NUTF2 TRADD DPEP3 DUS2 AGRP FBXL8 DPEP2 THAP11 CARMIL2 LOC107984813 ATP6V0D1 KIAA0895L FAM65A HSD11B2 TSNAXIP1 ENKD1 PSKH1 HSF4 E2F4 SLC9A5 LCAT EDC4 RANBP10 PARD6A LRRC29 ACD PSMB10 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |