Assay Details
Target Gene Details
Entrez Gene ID: | 64223 |
Gene Name: | MTOR associated protein, LST8 homolog |
Gene Aliases: |
GBL, GbetaL, LST8, POP3, WAT1 |
Location: |
Chr.16:2205177-2209417 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MLST8 | NM_001199173.1 | 2 | 426 | NP_001186102.1 |
NM_001199174.1 | 2 | 265 | NP_001186103.1 | |
NM_001199175.1 | 2 | 456 | NP_001186104.1 | |
NM_022372.4 | 2 | 456 | NP_071767.3 | |
XM_005255475.3 | 2 | 214 | XP_005255532.2 | |
XM_005255478.2 | 2 | 419 | XP_005255535.1 | |
XM_005255479.2 | 2 | 346 | XP_005255536.1 | |
XM_017023548.1 | 2 | 408 | XP_016879037.1 | |
XM_017023549.1 | 2 | 149 | XP_016879038.1 | |
XM_017023550.1 | 2 | 423 | XP_016879039.1 | |
XM_017023551.1 | 2 | 179 | XP_016879040.1 | |
XM_017023552.1 | 2 | 429 | XP_016879041.1 | |
AK021536.1 | 2 | 429 | ||
AK022227.1 | 2 | 235 | BAB13990.1 | |
AK098762.1 | 2 | 361 | ||
AK302201.1 | 2 | 179 | ||
AK304390.1 | 2 | 545 | ||
AU117583.1 | 2 | 429 | ||
AU121635.1 | 2 | 235 | ||
AY223837.1 | 2 | 180 | AAO73410.1 | |
BC001313.2 | 2 | 146 | AAH01313.1 | |
BC017119.1 | 1 | 157 | AAH17119.1 | |
BC052292.1 | 1 | 680 | AAH52292.1 | |
BC088354.1 | 2 | 174 | AAH88354.1 | |
BI761765.1 | 2 | 185 | ||
DA382215.1 | 2 | 430 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | SNORA64 FBXL16 TPSD1 CCDC154 PRSS27 HS3ST6 SNORD60 SPSB3 UNKL TPSAB1 LOC105371184 RAB11FIP3 AXIN1 MIR3176 SYNGR3 RPL23AP5 PRSS29P MIR3677 SNORA10 AMDHD2 GNPTG MSRB1 LOC107987233 HAGH MIR6859-4 C16orf59 JMJD8 MIR5587 PTX4 PDIA2 LINC00235 CCDC78 RAB26 PDPK1 RPUSD1 SNHG19 NPRL3 IGFALS LOC105371049 METTL26 MIR940 HBA2 RHBDF1 UBE2I LOC652276 SLC9A3R2 MIR4717 DECR2 RPS2 LOC729652 RGS11 SNRNP25 ABCA17P TRAF7 NTHL1 EME2 LMF1-AS1 LOC105371038 RHOT2 TBL3 MIR3177 CACNA1H GFER ZNF598 NOXO1 LOC106660606 TSR3 WFIKKN1 E4F1 LUC7L ABCA3 STUB1 TMEM8A PGP MSLN MCRIP2 KCTD5 MIR1225 MIR6767 FLJ42627 MIR662 SOX8 TBC1D24 ATP6V0C MIR3178 FAHD1 TMEM204 BRICD5 ARHGDIG SSTR5 CCNF NPW CAPN15 RAB40C LOC100134368 TSC2 HN1L LOC105371047 TPSB2 LMF1 PRR25 IFT140 CLCN7 PKD1 MIR6511B1 C1QTNF8 MRPS34 RNF151 NARFL NDUFB10 DDX11L10 TPSG1 BAIAP3 SNHG9 NME3 MIR6768 MAPK8IP3 HBM LOC100287175 ECI1 ERVK13-1 LINC00254 RPL3L C16orf91 HBZ WDR90 CHTF18 POLR3K FAM234A WASIR2 MEIOB LOC101929280 MLST8 TELO2 NHLRC4 HAGHL CEMP1 LOC105371046 NUBP2 MIR3180-5 METRN RHBDL1 NTN3 DNASE1L2 SSTR5-AS1 LOC107984876 CRAMP1 PIGQ MPG LOC105371045 WDR24 PRR35 MIR4516 FAM173A RNPS1 HBA1 SNORA78 HBQ1 CASKIN1 MRPL28 NME4 GNG13 |
nsv471072 | Chr.16:1971892 - 2317508 on Build GRCh38 | Loss | SNHG19 MIR1225 SNORD60 LOC105371049 MIR940 MLST8 SLC9A3R2 MIR4717 BRICD5 SYNGR3 MIR3180-5 NPW TSC2 TRAF7 NTHL1 MIR3677 DNASE1L2 TBL3 PKD1 GFER MIR6511B1 MIR4516 ZNF598 NOXO1 RNPS1 LOC106660606 E4F1 CASKIN1 ABCA3 ECI1 PGP RAB26 |
dgv4861n54 | Chr.16:2083900 - 2246850 on Build GRCh38 | Loss | DNASE1L2 SNHG19 MIR1225 SNORD60 LOC105371049 PKD1 MIR6511B1 MIR4516 MLST8 BRICD5 E4F1 MIR3180-5 CASKIN1 ECI1 PGP TSC2 TRAF7 RAB26 |
dgv4863n54 | Chr.16:2141733 - 2274302 on Build GRCh38 | Loss | DNASE1L2 SNHG19 SNORD60 MIR940 MLST8 RNPS1 LOC106660606 BRICD5 E4F1 CASKIN1 ECI1 PGP TRAF7 MIR3677 RAB26 |
nsv1711 | Chr.16:2199093 - 2232650 on Build GRCh38 | Insertion | BRICD5 E4F1 MLST8 PGP |
nsv457351 | Chr.16:2156590 - 2274302 on Build GRCh38 | Loss | RNPS1 LOC106660606 DNASE1L2 BRICD5 E4F1 MIR940 CASKIN1 MLST8 ECI1 PGP TRAF7 MIR3677 |
nsv1052260 | Chr.16:2074546 - 2629655 on Build GRCh38 | Gain | SNHG19 MIR1225 MIR6767 SNORD60 LOC105371049 MIR940 TBC1D24 MLST8 LOC652276 ATP6V0C MIR4717 MIR3178 BRICD5 CEMP1 LOC729652 CCNF MIR3180-5 ABCA17P TSC2 TRAF7 MIR3677 NTN3 DNASE1L2 AMDHD2 PKD1 MIR6511B1 MIR4516 RNPS1 LOC106660606 C16orf59 E4F1 MIR6768 CASKIN1 ABCA3 ECI1 PGP RAB26 PDPK1 |
nsv952902 | Chr.16:2143400 - 2339999 on Build GRCh38 | Deletion | DNASE1L2 SNHG19 SNORD60 MIR940 MLST8 MIR4717 RNPS1 LOC106660606 BRICD5 E4F1 CASKIN1 ABCA3 ECI1 PGP TRAF7 MIR3677 RAB26 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |