Assay Details
Target Gene Details
Entrez Gene ID: | 8515 |
Gene Name: | integrin subunit alpha 10 |
Gene Aliases: |
PRO827 |
Location: |
Chr.1:145891208-145910189 on Build GRCh38 |
Assay Gene Location: | Within Exon 29 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ITGA10 | NM_001303040.1 | 27 | 3932 | NP_001289969.1 |
NM_001303041.1 | 26 | 3820 | NP_001289970.1 | |
NM_003637.4 | 30 | 4249 | NP_003628.2 | |
XM_005277436.3 | 29 | 4000 | XP_005277493.1 | |
XM_011510083.2 | 26 | 3680 | XP_011508385.1 | |
XM_011510084.1 | 19 | 2677 | XP_011508386.1 | |
XM_017002622.1 | 28 | 4206 | XP_016858111.1 | |
XM_017002623.1 | 28 | 4203 | XP_016858112.1 | |
XM_017002624.1 | 27 | 4092 | XP_016858113.1 | |
XM_017002625.1 | 27 | 4092 | XP_016858114.1 | |
XM_017002626.1 | 26 | 3963 | XP_016858115.1 | |
XM_017002628.1 | 24 | 3656 | XP_016858117.1 | |
AF112345.1 | 30 | 4150 | AAF21944.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1005055 | Chr.1:145642988 - 148991068 on Build GRCh38 | Loss | HYDIN2 PIAS3 CHD1L LOC100132057 FMO5 PDE4DIP RNF115 LINC00624 LOC101927468 POLR3C GJA5 HFE2 RBM8A MIR6077 RNVU1-3 PPIAL4G RNVU1-1 ANKRD34A NBPF13P NBPF10 GPR89A PRKAB2 PDZK1 RNVU1-8 MIR6736 RNVU1-7 MIR5087 LOC100505824 NUDT4P1 NBPF11 LINC01138 CH17-408M7.1 PDZK1P1 CD160 RNVU1-6 NBPF12 PDIA3P1 LOC105371242 LOC728989 ACP6 NUDT17 PEX11B ITGA10 NBPF14 NUDT4P2 GPR89B BCL9 LOC100996763 POLR3GL LOC100996517 TXNIP LOC105371226 ANKRD35 NOTCH2NL LOC284561 LOC101928979 GNRHR2 GJA8 LIX1L RNU1-13P |
esv3587420 | Chr.1:145824369 - 145905171 on Build GRCh38 | Gain | MIR6736 PIAS3 NUDT17 POLR3C ANKRD35 ITGA10 |
nsv831381 | Chr.1:145784568 - 145960930 on Build GRCh38 | Gain | PIAS3 ANKRD34A POLR3GL ANKRD35 RNF115 MIR6736 GNRHR2 NUDT17 POLR3C PEX11B LIX1L ITGA10 RBM8A |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |