Hs01912041_cn

• Gene Symbol: CDH15
• Assay Reference Genome Location: Chr.16:89183555 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 1013
• Gene Name: cadherin 15
• Gene Aliases: CDH14, CDH3, CDHM, MCAD, MRD3
• Location: Chr.16:89171755-89195492 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CDH15	NM_004933.2			NP_004924.1
	AK308596.1	3	1198
	AK308631.1
	BC008951.2			AAH08951.1
	D83542.1			BAA12012.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv952072	Chr.16:89032193 - 89201992 on Build GRCh38	Deletion	SLC22A31 ACSF3 LINC00304 CDH15 LOC400558
nsv1063024	Chr.16:88707330 - 89238482 on Build GRCh38	Gain	CDT1 MIR4722 LOC101927793 ACSF3 GALNS TRAPPC2L LOC100289580 LOC100129697 APRT LOC400558 PIEZO1 PABPN1L CTU2 ZNF778 LOC105371409 SLC22A31 LINC00304 LOC339059 CDH15 CBFA2T3 LOC107987238
nsv471115	Chr.16:88801844 - 89197442 on Build GRCh38	Loss	CDT1 LOC101927793 ACSF3 GALNS TRAPPC2L LOC100129697 APRT LOC400558 PABPN1L LOC105371409 SLC22A31 LINC00304 CDH15 CBFA2T3 LOC107987238
nsv573720	Chr.16:88968841 - 89184474 on Build GRCh38	Gain	ACSF3 LINC00304 CDH15 CBFA2T3 LOC400558
nsv573724	Chr.16:89100686 - 89217401 on Build GRCh38	Loss	ZNF778 SLC22A31 ACSF3 LINC00304 CDH15 LOC400558
nsv573674	Chr.16:88738775 - 89325907 on Build GRCh38	Gain	CDT1 LOC101927793 ACSF3 GALNS TRAPPC2L LOC100289580 LOC100129697 APRT LOC105371414 LOC400558 PIEZO1 PABPN1L ZNF778 LOC105371409 SLC22A31 LINC00304 LOC339059 LOC100287036 ANKRD11 CDH15 CBFA2T3 LOC107987238
dgv3066n100	Chr.16:89067685 - 89301626 on Build GRCh38	Gain	ZNF778 SLC22A31 ACSF3 LINC00304 ANKRD11 CDH15 LOC105371414 LOC400558
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	ZNF276 DEF8 SNORD68 CHMP1A LOC105371414 CPNE7 FAM157C LOC105371419 TUBB3 SLC22A31 LOC339059 SPG7 LOC107987238 URAHP CENPBD1 MIR4722 TCF25 CYBA SPATA33 RNF166 VPS9D1 GAS8-AS1 PIEZO1 SPIRE2 PRDM7 CTU2 CDK10 LOC107984817 LOC105371409 IL17C LINC00304 ANKRD11 TUBB8P7 DBNDD1 RPL13 GALNS TRAPPC2L LOC100289580 FANCA LOC400558 SNAI3-AS1 ZNF778 VPS9D1-AS1 CBFA2T3 MC1R DPEP1 LOC101927817 CDT1 MVD LOC101927793 ACSF3 GAS8 LOC100129697 APRT PABPN1L AFG3L1P SNAI3 LOC100287036 CDH15 SPATA2L
esv2763149	Chr.16:89179547 - 89368114 on Build GRCh38	Gain	ZNF778 SLC22A31 LOC100287036 ANKRD11 CDH15 LOC105371414
dgv5320n54	Chr.16:89114475 - 89197443 on Build GRCh38	Loss	SLC22A31 ACSF3 LINC00304 CDH15 LOC400558
nsv509638	Chr.16:89152681 - 89296203 on Build GRCh38	Insertion	ZNF778 SLC22A31 ACSF3 LINC00304 ANKRD11 CDH15 LOC105371414 LOC400558
nsv573727	Chr.16:89169527 - 89193067 on Build GRCh38	Loss	CDH15
nsv1141297	Chr.16:89182392 - 89191792 on Build GRCh38	Duplication	CDH15

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Process(es)

cell adhesion
homophilic cell adhesion via plasma membrane adhesion molecules
adherens junction organization
positive regulation of muscle cell differentiation

Function(s)

calcium ion binding
protein binding